Shewanella sp. LZH-2: JM642_09550
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Entry
JM642_09550 CDS
T10525
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00860
Porphyrin metabolism
shel01100
Metabolic pathways
shel01110
Biosynthesis of secondary metabolites
shel01120
Microbial metabolism in diverse environments
shel01240
Biosynthesis of cofactors
Module
shel_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
JM642_09550 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shel04147
]
JM642_09550 (hemB)
Enzymes [BR:
shel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
JM642_09550 (hemB)
Exosome [BR:
shel04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
JM642_09550 (hemB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
DUF3502
DUF2336
Motif
Other DBs
NCBI-ProteinID:
QRK81293
LinkDB
All DBs
Position
complement(2140858..2141856)
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AA seq
332 aa
AA seq
DB search
MSSTRENPLKPLRRLRRLRRTEAMRDLVRETHISLSDLVHPLFIEEHISQAVPISTLPGI
CRLPESAVADEIQRLYALGIRYVMPFGISHTKDAQGSDTWDDNGLLARMIRTIKTAAPEM
MVIPDICFCEYTDHGHCGVLHHDEVCNDQTVANLVKQSITAAKAGADMLAPSAMMDGQIK
AIRQGLDEAGFEHVAILAHAAKFASSFYGPFRAAVDCELSGNRKGYQLDYANGRQALLEA
LLDEEEGADILMVKPGTPYLDVLSRLRQQTHLPLAAYQVGGEYAGIKFAALAGALDERAV
VTETFIGLKRAGADLIVSYYAKQYAEWLAQSR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtaccagagaaaatccccttaaaccccttcgccgtttaagacgcctgcgccgc
accgaggccatgcgcgacctagtgcgtgaaacccatatttccctaagcgacttggttcac
ccactcttcatcgaagaacacatcagccaagccgtacccatttcaaccttgccggggatc
tgccgtctgcccgagagtgcggttgccgatgaaattcaaaggctttacgccctagggatc
cgttatgtgatgccctttggtatttcccacaccaaagatgcacagggcagcgacacttgg
gatgacaatggcttactggcacgaatgatccgcaccatcaaaaccgccgcaccagagatg
atggtgatccccgatatttgtttttgtgaatataccgaccacggacactgcggcgtattg
caccatgacgaagtctgtaacgatcaaaccgtggctaacttagtcaaacaatccattacc
gccgccaaagcgggagccgatatgctggcaccatcggccatgatggacggtcagataaaa
gcgatacgacaagggttagatgaagctggttttgagcacgtggccattttggcccatgct
gcaaagttcgcctcatccttctatggaccatttagggccgcggtggattgtgaacttagc
ggaaaccgtaaaggctaccagctcgactacgccaatggtcgccaagccttgctcgaagca
ctgctcgatgaagaggaaggcgcggatattttgatggtaaagcccggcacaccgtatttg
gatgtgttaagtcgcctaaggcagcaaacccaccttcccttagcggcttatcaggttggc
ggcgaatatgccggtattaaatttgctgcactggcgggcgccctcgatgagcgcgccgtc
gtcaccgaaacctttatcgggttaaagcgggctggcgccgatttaatcgtcagctattac
gcgaaacaatatgccgagtggttagcgcaatcccgctaa
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