Shewanella sp. LZH-2: JM642_09645
Help
Entry
JM642_09645 CDS
T10525
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
shel Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shel01011
]
JM642_09645
Enzymes [BR:
shel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JM642_09645
Peptidoglycan biosynthesis and degradation proteins [BR:
shel01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JM642_09645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM1_NFP_LYK
LysM3_NFP
LysM_OapA
Motif
Other DBs
NCBI-ProteinID:
QRK81309
LinkDB
All DBs
Position
complement(2159857..2161404)
Genome browser
AA seq
515 aa
AA seq
DB search
MRVSLYVVVGGFALLTGCQTLDNPQVPKPEAETVTTENTVPQYYLATEPESAQITDVWER
IRQGMQLPIPDKKLVNYYRDWYINNPKHLELISERAAPYMYLIVEELEKRHLPIEIALLP
IIESAFDPSASSASAASGLWQFTTPMASHFGLEMNWWYDGRRDVPASTTAALDMLEYLYD
KTNNNWLYAIAAYNSGESRVLNAIKRNEDKGLKTDFWSLDLPKETKRYVPQLLALAEVIK
HADEYGITLAPIDNSPSIEVVDIDSQIDLAMAAGLANMTTNELLKLNPGYNRWATSPMGP
HTLVLPIDKSEEFKKALAETESEARVSWLRYTIKPGDSLGSIAEKHHTSINAIRAANGMK
NNNIIAGRPLIIPVSADDKQLYALSTSQKLPKKAAVAASGNKLTYKVKSGDSLWQIAQAH
NVSVKQLMTWNHLSKDSKLQSGQQLTIVAPQEKHDNEQIRTVSYKVKAGDSLARIANKFK
VTVPELREWNGLTASQYIQPGQVLKLVVDESNLNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagagtatcactttatgttgtagtagggggatttgccctactcacaggttgtcagacg
ttagacaaccctcaggtgcccaaacctgaagctgaaaccgtcacgaccgaaaataccgtc
ccacagtattatctcgcaaccgaacctgaatcggcgcaaattactgatgtatgggaacga
attcgtcaaggaatgcagttacccattccagacaagaaactcgttaactattatcgcgat
tggtacattaacaaccctaaacaccttgaattgatttctgagcgtgcagcgccttacatg
tatttgatcgtcgaagagcttgaaaaacgccatctaccaatcgagatagccctgcttccg
attattgaaagcgctttcgatcccagtgcttcttcggccagtgctgcctcagggctttgg
caatttaccaccccgatggcgagccactttgggttagaaatgaactggtggtatgacggc
cgtcgcgatgtgcctgcatccacgacagcagccctagatatgctcgaatatttgtacgat
aaaaccaataataattggctttatgcaattgcggcctacaactcaggagagtcacgcgta
ctcaatgcgattaaacgcaacgaagataaaggtcttaaaaccgatttttggtcgctcgat
ctcccaaaagaaaccaaacgttatgtgccacagttattggcgctcgccgaagtgattaaa
catgccgatgaatatggcattactctggcacccattgataacagcccttcaatcgaagtg
gttgatatagacagtcaaattgacttagccatggcagcaggtctcgccaatatgaccacc
aatgagctgttaaagctcaatccaggttacaatcgctgggcaacctcaccaatgggccca
cacactttagtattacccattgataaatctgaagagttcaaaaaagcacttgcagaaaca
gaaagtgaggcccgtgtaagttggcttagatatacgattaagcctggagatagtttagga
tctattgcagaaaaacatcatacaagcatcaatgcgatccgtgctgctaatggtatgaaa
aacaacaatatcattgctggaagaccgctaattatcccagtctctgctgatgataaacaa
ctgtatgccctatcaaccagtcagaaattacctaaaaaagccgctgttgccgcctcgggt
aacaagttgacctataaagtaaaatccggtgatagtttgtggcaaattgcccaagcacat
aatgttagcgtcaaacagttaatgacttggaaccatttaagcaaagacagcaaattacaa
agtggtcagcaattgacgattgttgcaccacaagaaaaacacgataacgagcagatccga
accgtcagctacaaagttaaagctggtgattcactcgctcgaattgcaaacaagtttaaa
gtgactgttcctgaacttcgcgaatggaacggcttaaccgcatcacaatatattcaaccc
ggtcaagtgttgaaactggttgtagatgaaagcaatttaaatacatag
DBGET
integrated database retrieval system
