Shewanella sp. LZH-2: JM642_10045
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Entry
JM642_10045 CDS
T10525
Name
(GenBank) FNR family transcription factor
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
shel Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shel03000
]
JM642_10045
Transcription factors [BR:
shel03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
JM642_10045
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SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
MarR_2
DUF6917
RXLR_WY
Motif
Other DBs
NCBI-ProteinID:
QRK81377
LinkDB
All DBs
Position
complement(2241647..2242399)
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AA seq
250 aa
AA seq
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MTIEQNKNRRPAASGCAIHCHDCSMGTLCIPFTLNANELDQLDDIIERKKPIQKGEQIFK
SGDPLKSLFAIRSGTIKSYTITEQGDEQITGFHLAGDVIGFDGIHAQSHQSFAQALETSM
VCEIPFNILDELSGTMPKLRQQIMRLMSNEIMSDQEMILLLSKKNAEERLAAFISNLANR
FGNRGFSAKEFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGLIEVKGKYIIIVDYNELN
LLAGNARIAR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacaatagagcagaataaaaaccgtcgtcccgccgccagtgggtgcgcaattcattgt
cacgattgcagtatgggaaccctttgtatcccattcaccctcaatgcaaatgaactcgat
caactcgatgacattattgagcgtaagaaacctattcaaaaaggcgaacagatttttaaa
tcgggtgatcctttaaaatcactctttgcgatccgctcaggcaccataaaaagttacact
atcaccgaacaaggcgatgaacagatcactggctttcatttagcgggagatgtcattggt
tttgatggtattcatgcacaatctcatcaaagttttgcacaagccttagaaacctccatg
gtgtgtgaaatacccttcaatattctcgatgaactttcaggcacaatgcctaaattacgc
caacaaatcatgcgcttaatgagtaatgaaatcatgagcgatcaagaaatgattttgctg
ctcagtaagaaaaatgcagaagaacgcctcgctgcatttatcagtaatctcgctaaccgc
tttggtaatcgaggtttttctgccaaagaatttcgcttgaccatgacacgtggggatatt
ggtaattacttaggccttaccgttgaaaccatcagtcgcttgttaggccgcttccaaaaa
tctgggttaatcgaagtaaaaggaaagtacatcattatcgttgattataatgaacttaat
cttctagcgggtaatgccagaattgccagataa
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