Shewanella sp. LZH-2: JM642_10190
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Entry
JM642_10190 CDS
T10525
Name
(GenBank) ABC transporter permease
KO
K23509
galactofuranose transport system permease protein
Organism
shel Shewanella sp. LZH-2
Pathway
shel02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JM642_10190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shel02000
]
JM642_10190
Transporters [BR:
shel02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Galactofuranose transporter
JM642_10190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
RIC3
Motif
Other DBs
NCBI-ProteinID:
QRK81403
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All DBs
Position
complement(2279742..2280959)
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AA seq
405 aa
AA seq
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MKSSAETLSSTRMSADLISPQMNASEAHSSERQPRMQESHKTMVQEKNARYQAGKSTSIG
RYLWPLLALGILLLANLFIDSSFFNISYQDDRLYGSLIDILNRSAPVALLSIGMSLVIAT
GGIDLSVGAVMAIAGAVCANLLLVPDLSLVIVIAAGLSVGLLAGCINGGLVSFLGIQPIV
ATLLLMVAGRGVAQLINQGQIITFQHPGFAAIGVGQFLGLPMPVWIVIGMLIFSQLLLRK
TALGLFIEAVGCNAKASRYLGINDKSIKLFAYAIAGLCAALAGMISTADIQGSDANNAGL
WLELDAILAVVIGGAALTGGRFSLMLSVVGALIIQTLATTIIVSGLPAKFNLLIKAIVIL
TVLLLQSAKFRRQLSALFKSKRQADAKPAEKGTSAKVSTATGEKP
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagctcagccgaaaccctatcatccacacgcatgtccgccgatttgatctcaccc
cagatgaatgcatctgaggcgcattcatctgagcgacaaccacggatgcaggaaagccac
aaaaccatggttcaagaaaaaaatgcccgttaccaagcgggcaagtcgacctccattggt
cgatacctctggccactcttggctttaggtattctgttacttgccaatctgtttattgat
agcagtttctttaatatcagctatcaagacgacagactctatggctctttgattgatatc
ttaaatcgcagtgcacccgtagcgctgctctcaattggtatgagtctcgtgattgccact
ggcggtattgacttgtcggttggtgccgtgatggcgattgcgggcgcagtttgcgccaat
ctactgttagtgccggatttaagcttagtcatcgtcattgctgcgggcttaagcgttggg
ctcttagccggttgtattaatggcggtctggtgagtttcttaggcattcaaccgattgtc
gcaaccttgttgcttatggtggcagggcgcggtgttgctcagcttatcaaccaagggcaa
attatcaccttccagcacccaggctttgccgccattggcgtgggccagtttttaggcctg
ccgatgcctgtgtggattgtgattgggatgctgatctttagccaattactgctacgtaaa
accgccttagggctgtttatcgaagcggtgggctgtaatgctaaggcgagtcgttacctt
gggatcaatgataaatccattaaattgttcgcctatgccattgcgggtctgtgcgcggcg
ttggccgggatgatcagcaccgccgatatccaaggttcagatgcgaataatgccggactg
tggcttgagctcgatgccatattagcggtggttattggcggcgccgcactcacgggcggg
cgtttctccttgatgctgtcggtcgtcggcgccctgatcatccaaaccttagcaaccacg
attatcgtcagtggtttacccgctaagtttaacttgctgatcaaggccatcgttatcctg
accgtgctgctgttgcaatcggctaaatttaggcgccaattgtcggcgctattcaaatcc
aagcgccaagcggatgcaaaaccagcagaaaagggcacaagtgcaaaagtcagcacagcg
acaggagaaaaaccatga
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