Shewanella sp. LZH-2: JM642_10680
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Entry
JM642_10680 CDS
T10525
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shel Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shel02000
]
JM642_10680
Transporters [BR:
shel02000
]
Other transporters
Pores ion channels [TC:
1
]
JM642_10680
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QRK77806
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Position
2399348..2402017
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AA seq
889 aa
AA seq
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MITQTTVARAVRFSLLALVSTSLSPLVFAADETAVAEDKVERIEVTGSRIKRTDLENASP
VVVVSAADIEKGGFNSVQDVLGNLSQNSGGSMTQQEVHGFTPAASAVNLRGVGAGRVLTL
INGKRVPKYPFGAGGTDSFVDTANIPLGAIERIEILTTGASAIYGSDAMGGVINIILKKD
VEQSTLKYRFSDTVDGGLQNNQFSFMTGVSSDKANLTFFAEYEDRQALKGTDRPEWGTDI
VPGNPYAAYSSYGANIVTSDNKLFKTLSAAECEARGYQVMSNGRCGFDRSPQRDFSPEQK
RYSTMVNLTKELNDDHQLYSRIDYTHASTFTEIESATVGDDFKYKVVGDDVTIYNKSKGL
SQTFKKSSAFGGDFASAADGEYFYTRRMSELGPRTSDFETNNFSFLIGGKGYLTEGIEYD
TSWSIARQTVESTTTGSPTYQSMWDYLTEGTNGHSLLDVISNEDAAMLDYQGGKKGQSTL
SSFNAGISGEVFELPAGAVAYAAGIEYGKEWFYDKSDSFTTNGGVMGKGGSSAQGEREQY
ASYAEVAVPVIENLTVTLAGRYDYYDDESDVGGQFSPQVAVEYRPIDSLLLRGLYAETFR
APDMQRLFGEPTSAYSTVIDTPTCEASGPGPACDKIESLPITIGANPELEAETGKNYNLG
MVWDYNDLNLTLDYWIVEIDNLVNDPSAQYILDHSDAFTDKIIRDANGKLIQVNTQAINM
SSQKTSGIDFSIGYRYETANLGDLTARLEGTYLLKWEEQLTPDSEALDLIDGEGSAPKIR
GNLNLGWSYNDFATNLLFKYTDSMNGDRMDYFVENGLDADYSVTIDSHVEVNWSASYLVN
DALKISTGINNLFDAGPEIDQTQSSWPHYPRSYYNVVGREYYLALEMNF
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgattacgcaaacaaccgttgcacgtgcggttcgttttagtttacttgctttagtatca
acatctttatcaccattggttttcgcagctgatgaaaccgcggttgccgaggataaagtt
gagcgtatcgaagtaactggttcacgtattaagcgtaccgatcttgagaatgcttcacct
gtagtggttgtcagtgcagccgacattgaaaaaggcgggtttaactcagtccaagatgtt
ttaggtaacctatcgcaaaactctggcggctccatgactcagcaagaagtgcatggtttc
accccagctgcatctgctgtaaatcttcgtggtgttggcgctggacgcgttctcaccctc
atcaatggtaaacgcgtacctaaatatccttttggggccggtggtacagatagttttgtc
gataccgcaaacattccgttaggagcgattgaacgcattgagatcttaaccacaggtgca
tcagccatttacggttcggatgccatgggcggcgttatcaacattatcttgaaaaaagat
gttgagcaaagcaccttgaaatatcgcttctccgataccgttgatggtggcttacaaaac
aaccaattctcctttatgacgggcgtaagcagcgataaagcgaacctaactttcttcgcc
gaatacgaagatcgtcaagccttaaaaggaacagatcgcccagaatggggaacagatatc
gttccgggcaacccttatgcggcttacagctcatatggtgcgaacattgtcaccagcgat
aataaactgtttaaaaccttatctgctgcagaatgtgaggcacgtggttatcaagtgatg
tccaatggtcgctgcggttttgatcgctcgccacaacgggatttctctccagaacaaaaa
cgctattcaactatggtgaacctcaccaaagaactgaatgatgaccatcagctctactct
cgaattgactatacacatgcctcaacttttaccgaaattgagtcagcaactgtcggtgat
gactttaaatataaagtagttggcgatgatgtcactatctacaacaagtcaaaaggcctc
tcacaaaccttcaaaaaatcatcagcctttggcggtgattttgccagcgcagccgacgga
gaatatttctacactcgtcgtatgtcagagttaggtccacgtacttccgattttgaaacc
aataacttctcgttcttgatcggtggtaaaggttatctgactgaaggcatcgaatatgac
acatcttggtctattgcccgccaaactgtagaatccaccacaacgggctcaccaacttac
caaagtatgtgggattatttgaccgaaggaaccaatggtcattctctattggatgttatt
tccaatgaagatgccgccatgctggattatcaaggtggtaaaaaaggtcaatcaacccta
tcaagctttaacgccggtattagtggcgaagtctttgaattaccagcaggcgccgtagct
tatgctgctggtatcgaatatggcaaagaatggttttatgacaaatccgatagctttacc
actaacggcggtgtcatgggtaaaggcggtagcagcgctcaaggtgaacgtgaacaatat
gctagctacgctgaagtggctgttcctgtgattgaaaacctcacagtgaccttagctggc
cgttacgactattacgatgacgaatcagatgtgggtggtcaattcagtcctcaagtggct
gtagaataccgtcctatcgacagcttactgctacgtggtctatatgcagagactttccgt
gctccagatatgcagcgtttatttggagaacccacgtcagcctatagtactgtgattgat
actcctacttgtgaagcctctggccctggtcctgcttgcgataagatcgaatccttgcca
attaccattggtgctaaccctgagttagaagctgaaacaggtaaaaactataaccttggt
atggtatgggattacaacgatctcaatctgacattagattactggattgttgaaatcgat
aacctagtgaatgatcctagcgcccaatatattctggatcattcagatgcatttacagac
aaaattatacgtgatgcgaatggcaagttaattcaggtgaatacccaagcgattaacatg
tcatcacaaaaaacctctggtatcgacttctctatcggttatcgctatgaaactgccaac
ttaggtgatttaaccgcccgcttagaaggcacctacttactgaaatgggaagagcaatta
accccagattcagaggcattagatcttattgatggtgaaggttcagcgcctaaaatccgc
ggtaacttgaacttaggttggagctataacgattttgcgactaacttattgttcaaatac
actgacagcatgaatggcgatcgcatggattacttcgtcgaaaatggtctggacgcagat
tacagcgtaacgatagacagccatgttgaagtgaactggtcagcaagttatcttgtcaac
gatgcactaaaaatctcaaccggcatcaacaacttgtttgatgcgggccctgagattgat
caaacccagtcatcgtggccacattatccacgttcttactacaacgtagtaggccgtgag
tattacctcgctctggaaatgaacttttaa
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