Shewanella sp. LZH-2: JM642_10740
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Entry
JM642_10740 CDS
T10525
Name
(GenBank) sodium:proton antiporter
KO
K18218
tetracycline resistance efflux pump
Organism
shel Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shel02000
]
JM642_10740
01504 Antimicrobial resistance genes [BR:
shel01504
]
JM642_10740
Transporters [BR:
shel02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JM642_10740
Antimicrobial resistance genes [BR:
shel01504
]
Gene variants
Tetracycline resistance genes
Transporters
JM642_10740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
DcuC
Motif
Other DBs
NCBI-ProteinID:
QRK77817
LinkDB
All DBs
Position
complement(2412216..2413598)
Genome browser
AA seq
460 aa
AA seq
DB search
MSEPTALSLIPPLVVLVLAVWLRRPILSLIIGAVTGFLLLDPTQVLNNFASTSLKVMADE
TIGWLILVCGCFGALIALLVRTGGALAFGRNALKFAKGPRSSLFMTFILGIVIFIDDYLN
ALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLSTWAVFFGGLLVDNGVAAEGQ
GISVYMQAIPYMLYAWLAVAMVLLVALGVVPAIGPMKKAELRAAKGEPAEAQVDLDQVQT
SDEYAIAAIEEEFKHADNQGKLHNFLVPILLLVAFTVYFDIDVWKGLLATLVITLPYYAV
QRLMPLSEMMDQMIDGFKSMLPAIGTVIAAFVFKDVCDALLLPQYVIESLSPFMTPKLLP
AVVFLSMAILAFATGSSWGIFAVTIPIVMPLAQSVGADIPLVIGALLSASSFGSQACFYS
DSTVLAAQGSGCNLVSHAVTQLPYALIAAVIAFFGFILIA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccgacagcgttaagtcttattccacctttggtggtattggtgttggccgtt
tggttacgccgccccattttatctttgatcattggtgcggtaacgggttttttgttactt
gatccaacgcaagttttaaataattttgcaagtacttcattaaaagtcatggccgatgaa
actatcggttggttgattttggtgtgtggctgttttggtgccttgattgcactgttagta
cgtactggcggtgctttggcatttggtcgaaatgcattgaaatttgcaaaagggccaaga
tcttccctgtttatgacctttattctggggattgtgatttttattgatgactatctgaat
gcgctaactgtgggtgaaaccatgaagcgtgtaacggataagtttaaagtctcccgcgaa
atgctggcttatgtggtggattccacagcggctcctgtgtgtgtattagttccgctctcc
acgtgggcggtgttttttggtggcttactggtcgataacggggtggccgctgaaggtcag
ggtattagcgtctacatgcaagctataccctatatgctttatgcttggttagccgtcgcg
atggtattactggttgcattgggcgtggttcctgctattggcccgatgaaaaaagctgag
ctgcgcgcagcaaaaggcgagcccgctgaagcgcaagtcgatttagaccaagtgcaaacc
tctgatgaatatgccatcgcggcaattgaagaagagtttaagcatgctgacaatcaaggc
aaattgcataactttttagtgccaattttattactggttgcttttaccgtttattttgat
atcgacgtgtggaaagggttattagcgacgctggttatcacgctcccttactatgcagtt
cagcgtttgatgccactgtcagaaatgatggatcagatgattgatggttttaagagcatg
ttgccagctattggtactgtcattgcggcatttgtgtttaaagatgtgtgtgatgcgcta
ttactgccacagtacgtgattgaatctttaagcccatttatgacgcctaagctgttacct
gccgtggtattcctatcaatggcgattttggcctttgcgacgggttctagttggggaatt
tttgcagtaaccatcccaattgtgatgccactggcgcaatcggtgggtgcggatattcca
ttagtgattggtgcgctgttgtcggcttcttcttttggtagccaagcgtgtttctactct
gattcaaccgttttagctgcccaaggctcgggttgtaacttagtaagccatgcggtgact
cagctaccttatgcgttaattgccgcggttattgcattctttggctttatcctgattgct
taa
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