Shewanella sp. LZH-2: JM642_12000
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Entry
JM642_12000 CDS
T10525
Symbol
sucC
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00020
Citrate cycle (TCA cycle)
shel00640
Propanoate metabolism
shel00660
C5-Branched dibasic acid metabolism
shel00720
Other carbon fixation pathways
shel01100
Metabolic pathways
shel01110
Biosynthesis of secondary metabolites
shel01120
Microbial metabolism in diverse environments
shel01200
Carbon metabolism
Module
shel_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shel_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JM642_12000 (sucC)
00640 Propanoate metabolism
JM642_12000 (sucC)
00660 C5-Branched dibasic acid metabolism
JM642_12000 (sucC)
09102 Energy metabolism
00720 Other carbon fixation pathways
JM642_12000 (sucC)
Enzymes [BR:
shel01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
JM642_12000 (sucC)
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Paralog
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
DUF3843
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
QRK78040
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Position
complement(2703907..2705073)
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AA seq
388 aa
AA seq
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MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRIGGNLWVVKCQVHAGGRGKAGGV
KVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRSTRR
VVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLNPTQMKQFTKI
FMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPKIKAMHDPSQDDA
REAHAAMFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE
AFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGREV
LAKSGLDIIAANSLTDAAEQVVKAAEGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcatgagtatcaggcaaaatccttatttgccgaatatggtttaccagtgtca
gaaggttttgcttgtgatacagcccaagaagctgtagaagcagctggccgtattggcgga
aatttatgggttgttaagtgtcaagtacacgcaggcggccgcggtaaagcgggtggcgtt
aaagtcactggcgataaagaagaaatcagagcctttgccgaacactggttaggcaaaaat
ctggtgacttatcaaacagatgagaaaggtcagccagttgctaaaattttagtagaaagc
tgcaccgacatcgctaacgaactgtacttaggtgcagtagttgaccgtagcacccgtcgt
gtggtgtttatggcctcaactgaaggcggtgttgagattgagaaagtggccgaagaaacg
ccagaactcattcacaaagcgatcatcgatcccctgacgggtcctcagccataccaagcg
cgtgatcttggcttcaaactgggcttaaacccaactcaaatgaagcaattcaccaagatt
ttcatgggtctggcaacgatgttcgttgatcacgatttcgcactgcttgaaatcaaccca
ctggttatcaccactgaaggtaacctgcactgcttagacggcaaaattggtattgatggc
aacgcactgttccgtcaaccaaaaatcaaagcaatgcacgatccatcacaggatgacgcc
cgtgaagctcacgcagcaatgttcgaactgaactatgttgcgctggacggaaacgtaggt
tgtatggtgaacggtgctggtctggcgatgggtactatggacatcgttaacctgcacggc
ggcaagccagctaacttcctcgacgtaggtggtggcgcgacgaaagaacgtgttgctgaa
gcattcaagatcattctgtctgacagcaatgtaaaagccgttctggttaacatcttcggt
ggtattgttcgttgtgacatgatcgcagaaggtatcattggcgctgttaaagaagttggc
gttaaagtgccagttgtcgtgcgtttagaaggtactaacgctgaattaggccgtgaagta
ttagctaaatcaggtcttgatatcattgcagctaacagtctgactgatgcggctgagcaa
gtagttaaagctgcggagggcaaataa
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