Shewanella sp. LZH-2: JM642_12175
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Entry
JM642_12175 CDS
T10525
Name
(GenBank) acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00280
Valine, leucine and isoleucine degradation
shel01100
Metabolic pathways
Module
shel_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JM642_12175
Enzymes [BR:
shel01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
JM642_12175
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
BT_MCC_alpha
ATP-grasp
Biotin_lipoyl_2
HlyD_3
RimK
HlyD_D23
ATP-grasp_3
ATPgrasp_ST
GARS_A
GCV_H
APO_RNA-bind
Motif
Other DBs
NCBI-ProteinID:
QRK78075
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All DBs
Position
2752817..2754856
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AA seq
679 aa
AA seq
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MLTNSMFTKLLIANRGEIACRIIKTAQAMGVRTVALYSDADKNARHVAMADESFYLGGSA
PADSYLKGDLIIEIAKKAQAQAIHPGYGFLSENADFARKCEAAGIVFVGPGSDAIDAMGS
KSAAKAIMTAAQVPLVPGYHGDDQTDATLKAEALKIGFPMLIKAAYGGGGKGMRIVEHEG
EIMDAINSARREAASSFGNDKLLLERYLRQPRHVEVQVFADTFGNAIYLSDRDCSIQRRH
QKVVEEAPAPGLSDELRAQMGEAAVAAAKAIDYVGAGTVEFLLDTDNSFYFMEMNTRLQV
EHPVTEMVTGQDLVKWQLMVASGQPLPLKQDEVRIHGHAFEVRIYAEDPQNEFLPASGKL
NFLREPEQSKYVRIDSGIRENDVISNFYDPMIAKLIVWDESRPRALQRLVHALESYQISG
LKHNIEFLANIAEHPAFAKADFSTDFINRYGDALIGSASSEADTALAFAALYQVLARKEA
AKAQAINSADPYSPWGQVSGFRLNSVSQHSIALLDDAHELQQLVLLDFGDHYQLSLPTEE
GHVSKSLSGELKQDLLLAEINGHKSKVPVSAQGDDFTLFLPSGSYHFRAVKTQVVEAESS
NEDKLKAPMNGTVVTHLVEVGAEVKAGQGLLVMEAMKMEYTIEAPFDGIVTEFYFKAGEL
VSDGAVLLHVEPKAQSEEA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgttgactaacagcatgttcactaagcttttaattgctaaccgtggtgaaattgcctgc
cgcattatcaaaaccgcgcaggccatgggcgttcgcaccgttgccttatattctgatgcc
gataaaaacgcccgccatgttgccatggccgacgaatcgttttacttaggtggcagcgct
ccggcggattcttacctcaagggcgacttgattattgagattgccaaaaaagctcaggcg
caagccattcacccaggctatggcttcttatcggaaaacgccgactttgctcgcaagtgt
gaggcggccggaatcgtatttgttggcccaggcagcgatgccatcgatgccatgggcagc
aagagcgcggccaaagccattatgacggcggcgcaagtgcctttagtgccgggttaccat
ggcgacgatcaaaccgatgccaccctcaaggccgaagccttaaaaatcggcttcccgatg
ctgattaaagccgcctacggtggcggtggcaaaggtatgcgtatcgttgagcatgaaggc
gaaatcatggacgccatcaactcggcgcgccgtgaagcggcctcctcctttggtaacgat
aaattattgctggagcgttatttacgccagcctcgccatgtcgaagtccaagtgtttgcc
gatacctttggcaatgcaatttacttatcggatcgcgactgctcgattcagcgccgccat
caaaaagtggtcgaagaagccccagccccaggtttaagcgatgagcttcgcgcccaaatg
ggtgaagccgctgtcgctgccgccaaggctatcgattatgtcggcgcgggaaccgttgaa
ttcctgttagataccgacaatagcttctactttatggagatgaatactcgtctgcaggta
gagcatcctgtgaccgaaatggtgacgggccaagacttagtcaaatggcagttaatggtc
gccagtggtcaacctttaccgctcaaacaggacgaagtgcgtatccatggacacgccttt
gaggtgcgtatttacgccgaggatccgcaaaatgagtttttacccgccagcggtaagctc
aacttcctgcgcgagcctgagcaaagcaaatatgtgcgtatcgattccggcatccgtgaa
aacgatgtgatcagtaacttttatgatccaatgatcgccaaactgattgtgtgggatgag
tcgcgcccacgtgcgctgcaacgcctagtgcatgccctcgagtcctatcaaatcagcggg
cttaaacacaatattgaatttttagccaatattgccgagcatcccgcctttgccaaggca
gactttagcaccgactttatcaaccgttacggcgatgcgctgattggcagtgcttcaagc
gaagccgacactgcacttgcctttgccgcgctgtatcaagtgcttgcccgtaaagaagcc
gccaaggcacaggcgatcaatagcgccgatccttactcgccttggggccaagtcagtggc
tttagactcaacagtgtcagccaacattctattgccctgcttgacgatgcccacgagtta
caacaattggtgctattagactttggtgatcactatcagctatctctgccaacagaagaa
ggtcatgtcagcaagtcccttagtggtgagcttaagcaggatttactgttagccgaaatc
aacggccataagagtaaagtaccagtcagcgctcagggcgatgattttacactgttttta
ccctcaggcagttatcacttcagggcggttaaaacccaagtggttgaggcagaatccagc
aatgaagataagctcaaggccccgatgaacggcacagtcgtgacccacttagtggaagtc
ggtgctgaggtgaaggcgggacaagggctactggtgatggaagcgatgaagatggaatac
accatcgaagcgcccttcgacggtattgttaccgagttctacttcaaggcgggcgaatta
gtgagcgatggcgctgtgctgctccatgttgagcccaaagcccagagcgaggaagcctaa
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