Shewanella sp. LZH-2: JM642_12520
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Entry
JM642_12520 CDS
T10525
Name
(GenBank) porin
KO
K09476
outer membrane pore protein F
Organism
shel Shewanella sp. LZH-2
Pathway
shel01501
beta-Lactam resistance
shel02020
Two-component system
Brite
Transporters [BR:
shel02000
]
Other transporters
Pores ion channels [TC:
1
]
JM642_12520
Antimicrobial resistance genes [BR:
shel01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, repression of porin OmpF [MD:
M00746
]
JM642_12520
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QRK78133
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Position
complement(2817688..2818884)
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AA seq
398 aa
AA seq
DB search
MNKTIVATALAALFLAPTVSAIEIYKDDKNAVEIGGFIDVRVINTQGETEVVNGASRINF
GFSRELTHGWNAFAKLEWGVNPVGNSDIVYSNRFESVQDEFFYNRLGYAGLSHDKYGTLT
IGKQWGAWYDVVYGTNYGFVWDGNTAGVYTFNKDDGAVNGVGRGDKTVQYRNTFGEVSIA
AQVQLKNSSFYTCDSVPDQDDCKKLWETGDRSAQQVDYDETYGFAVTYKATDKLTLTAGA
NRGEFDVSFGNGESTTAVDLIYGAGIMWGDFDANGWYAAANINKQENHDTDNLGRLIKEA
VGAETLLSYKFDNGLRYFVSYNVLDAGKDYVIQPNLPIYENDVFKRQFVVAGMHYLMDAN
TVIYLEGRKDFSDFTGVDEAAMALSEDDGIAIGIRYTL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacgatagtcgccactgcgttagcagcactctttcttgcgccaactgtatct
gcaatcgaaatctacaaagatgacaaaaatgcagtcgagataggggggtttattgatgtg
cgtgtaatcaacactcaaggtgaaactgaggttgtaaatggtgcttctcgaattaatttt
ggtttcagccgtgagttaacccatggctggaatgcgtttgctaagttggaatggggcgtt
aaccccgttggcaacagtgatattgtttatagtaaccgctttgaatctgtgcaggatgag
tttttttataaccgtttaggttatgccggtcttagccacgataaatacggtacactcact
attggtaaacaatggggtgcttggtacgatgtcgtttatggcactaactatggttttgta
tgggatggcaatactgcaggagtttacacctttaataaagacgacggagctgttaacggt
gtaggtcgtggtgataaaacggtgcaataccgtaacacgtttggtgaagtgagtattgca
gcgcaagtacagctaaaaaacagcagtttttatacttgtgattctgtgcctgaccaagat
gactgcaaaaagttatgggagactggtgatagatctgcccagcaagttgattatgacgaa
acctatggttttgcggtaacttataaagcaactgacaaattgactttaaccgctggtgct
aaccgtggtgaatttgacgttagctttgggaatggcgaatcaactaccgctgtcgatctt
atctacggtgcgggcattatgtggggtgattttgatgctaatggttggtatgccgctgca
aacatcaataagcaagaaaaccacgacaccgataatttagggcgtttgattaaagaagct
gttggagctgaaacgttactgtcatacaaatttgataatggtttacgttatttcgtatcc
tataacgtgctagatgctggtaaagattatgttattcagccaaatttacccatttatgaa
aatgatgtgtttaaacgacaatttgttgttgcaggtatgcactatctgatggatgccaat
acggttatctacttggaaggtcgtaaagatttcagcgattttactggtgtggatgaagcc
gcgatggcattgtcagaagatgatggcatcgctattggtattcgctacactctttaa
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