KEGG   Shewanella sp. LZH-2: JM642_12525
Entry
JM642_12525       CDS       T10525                                 
Name
(GenBank) DNA polymerase II
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
shel  Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:shel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shel03400]
    JM642_12525
Enzymes [BR:shel01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JM642_12525
DNA repair and recombination proteins [BR:shel03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    JM642_12525
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 DNA_pol_B_2 POL2_thumb DNApolII_insertion Sod_Fe_C DNA_pol_B_exo2 DNApolII_N
Other DBs
NCBI-ProteinID: QRK81555
LinkDB
Position
complement(2819105..2821492)
AA seq 795 aa
MSVQGRVLTRHAITCGSTLVLQYYLATVSGPVLVELPGSEYICFCHQSDMAALQLQTPGL
ALRFVPLMLKSFKRQAVAAIYAQSSSVFRHLQRIATDAGIPLFEADIRPEQRFLIERFVA
LDVAFLGHQVSNVGLQDRLPVFSAIRAKAVAPQPEIKLRSISLDFECSFDGLLYSVALYG
RDAQSQPYEKVIMVGEAQPDAAIYIEWVNDEAALIHRLIAWFTEFDPDVIIGWSVVTFDL
ALLYRRALLHRIPLRIGRGSALLEWKVENKFRPETLSLPGRVVLDGIDWLKAAFYQFERF
SLEFVAQALLGEGKAIHNVENRVQEIDALFTENKQGLAHYNLTDSRLVWDIFEHTQLWDF
ALARAELTGLELGRVGASVAAFNHLYLPHLHRAGFVAPAEPASQGIESPGGYVMDSVPGF
YQHILVFDFKSLYPSIIRTFLIDPKGLIEGLDNEEHILDESEIVPGFLGARFSRHQPILP
KLIQNLSEQREKAKREANAPLSQAIKIIMNSLYGVLGSQGCVFHDAKLASSITMRGHQIM
KQTRAWIEEMGYQVIYGDTDSTFVYLGSDPDLSDINALGKQIAAQINQQWQSKIVKEFQL
ESFLELQFERHYEQFFMPTLRGSEEGSKKRYVGAWRNRNGGLEITFKGMEQVRSDWSPLA
RKVQAELYERMFNQRDISGYLAGVISELQTGKRDAELVFSKRMRRNLEEYTAKSSPHVKV
ARQLCELTGKVSYGKRGAQIDYVITVNGPEPVSHRSSIIDYQYYIDKQISPIAEPIFSIM
KLNYTDIVSKQLLLI
NT seq 2388 nt   +upstreamnt  +downstreamnt
gtgagtgtacagggacgcgtcctgacgcgccatgctattacatgcggttcaacgcttgtg
ttgcagtattatctcgccactgtttctggcccagtgctggtggagttacctggctctgag
tacatttgtttttgccatcaaagcgatatggctgcattacagttacaaacgccggggctg
gcgctacgctttgtgccgcttatgcttaaaagttttaaaagacaagccgtggcggcgatt
tatgcccagtcgagcagtgtgtttcgtcacttacagcggatagcgacggatgctggtatt
cccttatttgaggcggatatccgtcccgagcagcgttttttaatcgaacgttttgtcgcg
ctcgatgtggcatttttagggcatcaagtaagcaatgtgggtttacaagaccgcttgccc
gtctttagcgccatacgggccaaagccgttgcaccgcagccggaaataaaattgcgttca
atctccctcgattttgaatgcagttttgacggattactctattccgtggccctttatgga
cgcgatgcgcaatctcagccctatgaaaaagtcattatggtgggcgaggcgcagcctgat
gctgcaatttacatcgaatgggtgaacgatgaagcggcgcttatccatcgtctcatcgct
tggtttactgagtttgatcccgatgtgatcattggttggtcggtggtgacctttgatttg
gccttgttatatcggcgtgcgttactgcaccggatcccgctgcgtatcggtcgaggtagt
gcgcttctcgagtggaaggtcgagaataaatttcggcctgaaaccttaagtttaccgggg
cgagtggtgctcgatggtatcgattggttaaaggcggccttttatcaattcgagcgcttc
tccttggaatttgtcgcccaagcgttactcggtgaaggcaaagcgattcataatgtagaa
aatcgagtccaagagattgatgcgctatttaccgaaaataagcaagggcttgctcactat
aatctgactgatagtcgcttagtgtgggatatttttgagcatactcagttgtgggatttt
gccctcgctcgcgccgagttaacgggattagaactggggcgggtaggcgcctcggtcgcc
gcattcaatcatttgtatctaccgcatttacatagagcgggtttcgttgcgcccgcagag
cctgcaagtcaaggtattgaaagccctggcggttatgtaatggattcagtccctggtttt
tatcagcatattttagtgtttgactttaaaagtctttatccatcgataattcgtactttt
ttgatcgatccgaaagggctcattgaaggtctggataacgaggaacatattttggacgag
tctgaaatcgttcccggttttttaggggctcgttttagtcggcatcaaccgatcctgcca
aaactcatccaaaatctctcagaacaacgcgaaaaagccaagcgggaggcaaatgcgcct
ttatcgcaagcaattaaaatcattatgaattcgctctatggggttttaggctctcaaggc
tgcgtgttccatgatgcgaaactggcaagctccatcaccatgcgcggtcatcaaataatg
aaacagactcgcgcttggatagaggaaatgggttatcaagttatttatggggacacggat
tccacctttgtctatttgggctctgatcctgatctcagtgatattaatgccttaggtaag
cagattgccgcgcaaatcaatcaacaatggcagagtaaaatcgtaaaggagtttcagcta
gaaagcttccttgagctacagtttgagcgccattacgaacagttttttatgccgaccttg
aggggatcggaggagggtagtaagaagcgttatgtcggtgcttggcgcaataggaatgga
gggctggaaatcacttttaaggggatggagcaggtgcgaagtgattggagccccttagcg
cgtaaggttcaagctgaactttatgagcgaatgttcaatcagcgagatatcagcggttat
ctcgctggtgtcataagcgaactgcagacaggaaagcgggatgctgaattagtgtttagt
aaacgaatgcgccgaaatcttgaagagtacaccgcaaaatcttccccccatgtcaaagtc
gcacgtcagctatgtgagttaacaggaaaggtatcctatggcaagagaggagctcagatt
gattatgtcatcactgtaaatggtcctgaacctgtttcacatagatcgtctataattgat
tatcaatactacattgataagcaaattagtcccattgcagagcctattttttcaataatg
aaattgaattacacagacattgtctctaaacagctgctgttaatttaa

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