Shewanella sp. LZH-2: JM642_13350
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Entry
JM642_13350 CDS
T10525
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
shel Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
shel03029
]
JM642_13350 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shel02000
]
JM642_13350 (bamA)
Mitochondrial biogenesis [BR:
shel03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
JM642_13350 (bamA)
Transporters [BR:
shel02000
]
Other transporters
Pores ion channels [TC:
1
]
JM642_13350 (bamA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
Dsc3_C
Motif
Other DBs
NCBI-ProteinID:
QRK78285
LinkDB
All DBs
Position
complement(3009722..3012202)
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AA seq
826 aa
AA seq
DB search
MRLNKLFASMLFVGASFSGTVLADTFQPFEVTDIQVEGLQRVALGAALLSLPVKVGDTVD
QLKIQQAIKSLYASTNFENISVSHDGGVLIVKVTERPTISAVTFEGNKDIKDEQLQESLD
GSGVKVGESLDRTMLTGIEKGLQDFYYGVGKYGAKVEAQVINLPRNRVELKFKFTEGLAA
EIRQINVVGNHEFTDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETIKTYYHNKGY
IRFEVTSTQVAMTPDRKGLYITINVNEGEKYKVKGVNLTGDLMGREELMKSILPIKAGDM
YNGGDVTFTEEMYSKYLGRFGYAYPEVKTYPEIDDKTKEVTLNINIKPGKRVYVRSINFT
GNTVTKDEVMRRELRQMEGAWLNSAQVEQSKARLNRLGFFETVDTETIQVPGTDDLVDVA
VKVKEQPSGSFNAGVGYGTESGLSLQFGVQQNNFLGTGNQAGVSLSTNKYSKNVNLSYTD
PYWTKDGVSLGGSVYWNEFDANEANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNT
ISEISAYEQALRFYNIYREDDPNADLSFDNFELSLGWYRSTLNRGTFPTDGSSQRLSGKM
TVPGSDLQYFKTDFDTNYYFPLNRSQSFVVLARGRLGYGNGYGQFNDNDQILPFWENYYS
GGSTSLRGFKSNSVGPRSFYLFRGSEPCAPDPSGDGCSLPGDPNSIQVSSGRSIGGNAIA
TASLEFIVPTPFLDEAYTNSVRTSFFLDAGNVWDTEFDFAKYQTLPAEEFDKLQDYSAPA
RIRASWGVSLQWLSPMGPMVFSLAWPIKEYEGDQTEIFSFNIGKTF
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaataaactttttgcctcgatgttattcgtcggtgcgtcgttttcagggact
gtgttggcggatactttccaaccctttgaagtgaccgacatccaagttgaaggtttgcag
cgagtcgcactgggtgctgccttgttaagcttaccagtgaaagtgggcgacactgtagat
cagttaaaaattcagcaagccattaaaagcctgtatgcctcaactaactttgagaatatc
tcagtcagtcatgatggcggcgtgttgattgtcaaagtcaccgaaagaccaaccatcagt
gctgtgacgtttgaaggcaacaaagacattaaagatgagcagttacaggaaagtctggac
ggctcaggcgttaaagtcggcgaatctttagaccgcacaatgctgactggcatcgagaag
ggattacaagacttctactacggcgtgggtaaatacggcgccaaagtcgaggcgcaggtg
attaacttgccccggaaccgtgtcgaacttaagttcaaatttactgaaggtttagcggcc
gaaatccgccaaattaacgtggttggtaatcatgagttcactgatgctgagcttatcggc
atgttagaactgaaagattatgtggcttggtgggatctgtttggtgagcgtcgctatcag
aagcaaaagcttcaagccgacctagagacgattaaaacctattaccacaacaagggttat
attcgctttgaagttacctcgactcaagtggcgatgaccccagaccgtaaaggcttgtac
atcactatcaacgtcaatgaaggtgagaagtacaaggtaaaaggcgttaacctcacgggc
gatctgatgggtcgtgaagagttgatgaaatcgattctgcctatcaaggcgggcgatatg
tacaacggcggtgatgtgaccttcaccgaagagatgtacagcaaatacttaggccgtttc
ggttacgcttacccagaagtgaaaacctaccctgaaattgatgataagaccaaggaagtg
accttaaacatcaatatcaaacctggtaagcgtgtgtatgttcgctccatcaactttacc
ggtaatactgtcactaaagatgaagtgatgcgtcgcgaactgcgtcagatggaaggtgct
tggttaaactcagcgcaggttgagcaatctaaagcccgtttaaaccgtttaggcttcttc
gagaccgtcgataccgagaccattcaagtgcccggtactgacgatttagtcgatgtagct
gttaaggtgaaagagcagccttctggctcatttaacgccggtgtcggttatggtactgaa
tcaggtctaagcctacagtttggtgtgcagcaaaataacttcctcggcacgggcaaccaa
gcgggtgtgagtttaagtaccaacaagtactctaaaaacgtcaacttatcttacaccgat
ccatattggactaaagatggtgtgagcttaggtggtagtgtttactggaacgagttcgat
gcgaacgaagccaaccttgaacgctataaaaacagctcctatggggtagcgctaaactct
ggtttcccgattaacgaatacaaccgtatcaacggcggtattggttatcgtcataacacg
atttcagaaatctctgcctatgaacaggcgctgcgtttctacaatatttaccgtgaagat
gatccaaatgcagacttaagttttgataactttgagctgagtttaggttggtatcgcagt
accttaaaccgaggaaccttcccaacagacggttcatcacagcgtttaagcggtaagatg
actgtacctggatcagatctgcagtacttcaagactgacttcgataccaactactatttc
cctctcaaccgcagtcaaagttttgtggtcttggcacgtggtcgtttaggctatggtaat
ggttatggtcaatttaacgataatgaccagatcctaccattctgggaaaactattactca
ggcggtagcacttcactgcgtggctttaagtctaactccgtaggtccgcgttccttctat
cttttccgtggaagtgaaccctgtgcgccggatccatcgggcgatggttgtagtttaccg
ggcgatccaaacagtattcaggtaagctctggccgttcaatcggtggtaacgctatcgca
actgcgagtttagagtttattgtaccgacgccattcttggatgaggcttataccaactct
gtacgtaccagcttcttcctcgatgccggtaacgtgtgggataccgagtttgattttgcc
aaatatcaaaccttacccgctgaagagtttgataagttacaagactacagtgcccctgcg
cgtataagagcatcttggggggtaagcttacagtggttatcaccaatgggccctatggta
ttcagcttggcatggccgattaaagagtacgaaggcgatcaaacagagatcttctcgttc
aatattggcaaaactttttaa
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