Shewanella sp. LZH-2: JM642_13530
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Entry
JM642_13530 CDS
T10525
Name
(GenBank) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA
Organism
shel Shewanella sp. LZH-2
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Gene cluster
GFIT
Motif
Pfam:
FabA
ketoacyl-synt
Ketoacyl-synt_C
KAsynt_C_assoc
ACP_syn_III
Motif
Other DBs
NCBI-ProteinID:
QRK78317
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Position
3055428..3061331
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AA seq
1967 aa
AA seq
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MSSQMHAHPTLQNSTAVPNDQRQSSKAMPKIAIVGLAVQYPDADTPEQFWQNLLDKKDSR
SQIDAAKLNANPADYQGVQGQADRFYCDKGGYIRNFRFDPQGYQLPPAAFEGLDESFLWA
LDCSKKALLDAGVDLTAPLLERTGIVMGTLSFPTASSNELFLPIYHQAVEKALKTKLNQP
QFALAPFANGSIADTQQAANGAIAHTASKLLSDALGLGGAQLSLDAACASSVYALKLACD
YLTTGKADMMLAGAVSGADPFFINMGFSIFHAYPDHGISAPFDSNSKGLFAGEGAGVLVL
KRLEDAERDGDNIYAVVSGIGLSNDGKGQFVLSPNSKGQVQAFERAYAAANTHPSNIEVI
ECHATGTPLGDKVELTSMERFFEDKLGGTKAPLIGSAKSNLGHLLTAAGMPGIMKMIFAM
RSGHLPPSINLTAPISSPKGLFSGNNIPTQLQTWPDKAGNDRRHAGVSVFGFGGCNAHLL
LESYQPTTHSPEKQAYKPVYQQQALTVIGMASHFGPLASINALDKALLNQTDAFIPLPPN
RWKGLDKHPDILNQFGLNRAPKGAYIEQFDFDFLRFKVPPNEDDRLISQQLLLIKVADKA
IRDAKLTAGSKVAVLVAMETELELHQFRGRVNLHTQLADSLKQQGVHLSNDEYLALEAIA
MDSVLDAAKLNQYTSFIGNIMASRIASLWDFNGPAFTISAAEQSVARCIDVAQNLLSQEA
LDGVVIAAVDLSGSVEQVILKNAQIAVDLDADSANPQWKVGEGAGAIVLTNQQASNSSQK
GYGQIRAQAFGTHHQLPKLLDSLITETAIANPSVPTAIHMVEQCIAPEQQLPTEQLLAQL
NLIGTPCNRVANTLGHNFAAAGMASLLSALLSLKNGSEGSDKNTDKQALVSTQSQGVSSL
LLLSQTATQAAQLELRLEQDLTLSEQKHLIKPVTLGGRDIYQHIVDTPLPALAAIQGKMR
KLQPVAPQATQTVPRVQAALLDTTAENATPFATPIAVESGMSSNAPHQYSAAPLAQDRAS
QDSAALLQNQKLAREAHLAFLQSREQGLKLADALLKAQLSQTTQMGSVAPHVTTSANTAA
AQHAVPVPELKPDHANVVPYTPPIPAAKPCIWNYQDLVEYAEGDIAKVFGADYAIIDSYA
RRVRLPTSDYLLVSRVTKLNAQMNRYQPSTMTTEYDIPVDAPFLVDGQIPWAVAVESGQC
DLMLISYLGIDFENKGERVYRLLDCTLTFLGDLPRGGDTLRYDISINHFARNGDTLLFFF
SYECFVGDKLILKMDGGCAGFFTDKELADGKGVIRTEAEIKLREQAQIALANEYARNGNQ
PRFTPLLNCAQTAFSYGQIHRLLSADIGGCFGGEHAAHQAKFGLQPSLCFASEKFLMIEQ
VSKLDVHGGAWGLGLIEGHKQLAHDHWYFPCHFKGDQVMAGSLMAEGCGQLLQFFMLHIG
MHLGVTNGRFQPLENASQKVRCRGQVLPQSGTLTYRMEVTEIGMSPRPYAKANIDILLNG
KVVVDFQNLGVMIKEEADCTRYSHSSSSQSHSSLSNDSQAANIAILAEQAPLMAQIPDMA
APVNKGVVPLKHVSAPIAPAGSKYANRVPDTLPFTPYHLFEFATGDIENCFGTDFSIYRG
LIPPRTPCGDLQLTTRVVAIEGKRGELKKPSSCIAEYEVPSNAWYYAKNSHPSVMPYSVL
MEISLQPNGFISGYMGTTLGFPGQELFFRNLDGSGKLLREVDLRGKTIVNDSRLLSTVIA
GSNIIQNFSFELSCDGEPFYRGNAVFGYFKADALKNQLGIDNGKITQAWHIERGIKADSQ
INLLDKNGRSFVAPQGKPYYRLAGGQLNFIDKAEIVKTGGKKGLGYLYAERTIDPSDWFF
QFHFHQDPVMPGSLGVEAIIELLQTYAIDQDLGAGFNNPKFGQILSEIKWKYRGQINPLN
KQMSLDVHITSIEDKDGKRIIKGDANLSKDGLRIYEVTDIAICIEEA
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
ttgagttctcaaatgcatgctcacccgactctgcaaaacagcacagctgtgccaaacgac
cagcgccaaagctcaaaggcgatgccaaagattgccatcgtcggccttgccgtccagtat
cccgatgccgacacaccggagcagttttggcaaaatctgctggataaaaaagattcccgc
agccaaattgatgcggctaaactcaatgccaatcctgcggattaccaaggcgttcaaggc
caagccgaccgtttttactgcgataagggcggctatatccgcaattttcgttttgaccca
cagggttatcagttgccgccagcggcatttgaagggctcgatgaaagctttttatgggca
ttagattgcagtaaaaaagccctgctggatgcgggtgtggatttaacggcgccgctgctt
gaacgcacagggatagtaatgggcaccctgtcgttcccgaccgcaagttctaatgaattg
tttttaccgatttaccatcaagcggttgaaaaggcattaaaaaccaagcttaatcaacca
caatttgccttagcgcccttcgccaatggttcgattgcggacacacaacaggcagccaat
ggtgccattgcccatacggcgtctaaattgttaagcgatgccctcggccttggcggcgca
cagctcagtctcgacgccgcctgcgccagctcagtctatgccctcaaattagcctgcgat
tatttaaccacgggtaaggccgatatgatgctcgcaggcgcggtatcgggcgccgatccc
ttctttatcaatatgggattctcgattttccacgcctatccagaccatgggatttcggca
cctttcgatagcaatagcaaaggcttattcgcgggcgaaggcgctggcgtattagtgctt
aagcgtttagaggatgccgaacgcgatggcgataatatctatgccgtggtcagtggcatt
ggcttatcgaacgatggcaaggggcaatttgtcttaagccccaacagtaagggtcaagtg
caagccttcgagcgcgcctatgccgccgccaacacccacccgagcaatatcgaagtgatt
gaatgccacgccaccggtacgccactgggggataaggttgagctcacctcgatggagcgt
tttttcgaagataaactcggcggcactaaggcgccgctaataggttcggctaaatccaac
cttgggcatttgctcactgcggctggcatgcctgggatcatgaaaatgatttttgccatg
cgttcaggccatctaccgccaagtatcaatttaacggcgccgatttcatcacctaagggg
ctgtttagcggtaataatatccctactcagttgcagacttggcccgataaagcaggcaat
gatcgtcgccatgcgggggtatctgtatttggttttggcggctgtaatgcccatttgttg
ttggaatcctatcaaccaacaactcacagccccgagaagcaagcctataaacctgtttat
cagcagcaagcattaaccgttatcggtatggcgtcgcactttgggcctttggcctcgatc
aatgcgctggataaggcgctattaaaccaaacggatgcctttatcccactgccgcctaac
cgctggaaaggcttagataagcaccccgatatccttaaccagtttggcctaaatcgcgcg
cccaaaggcgcctatatcgagcagtttgattttgattttctgcgctttaaagtgccgccc
aatgaggatgacaggctcatctcccagcaattgttgttgatcaaagtcgccgataaagcg
attcgcgatgccaagttaaccgctggcagcaaggtcgcggtgttagtggcaatggaaacc
gagcttgagctgcaccaattccgtggccgggtgaatttacacacccaacttgcggatagc
ttaaagcagcaaggcgttcacctctccaatgatgaatacctcgccctcgaggccatcgcc
atggacagcgtgctcgatgccgccaagctcaatcaatacaccagctttattggcaatatt
atggcgtcgcgtatcgcctcgctgtgggactttaatggtccggcgtttaccatctcagcc
gccgaacaatcggtcgctcgttgtatcgatgtggcgcaaaacctactgtcccaagaggcc
ctcgatggcgtagtgattgccgccgtggatttaagcggcagtgttgaacaggttatattg
aaaaacgctcaaatcgccgttgatctcgatgccgacagcgcaaatccacagtggaaggtg
ggtgaaggcgcgggcgctatcgtgctgacaaaccagcaagcgagcaacagttctcaaaag
ggttacggccaaattcgtgctcaagcatttggcacacatcatcagctgcctaagctgctt
gattcgttgataaccgaaacggctatcgctaatccttcagtgccaactgccatccatatg
gttgaacaatgtattgcccctgaacagcaactgccaacggagcagctattagcgcagctt
aatcttattgggacgccatgcaatcgagtcgccaatacccttgggcataactttgccgct
gcgggtatggctagtcttctgagtgccctgttaagcctaaagaacggctctgagggttca
gataaaaacaccgataagcaggcattagtgtctacccaaagccaaggagtgagctcactg
ctgctgttaagccaaacggcaacgcaggcggcgcaactagaactgcgccttgagcaggat
ttaactttgagtgagcaaaaacacttaatcaaaccagtcacgctcggtggccgcgatatc
tatcaacatattgtggatacgccactgcccgcacttgccgccatccaaggcaagatgcgc
aagttgcagcctgtcgcaccgcaggcgacacaaactgtgcccagagtacaagctgcacta
cttgataccacggctgaaaacgccaccccatttgccacaccaatagcagtagagagcggt
atgtcatctaacgcaccacaccaatattcggcggcacccttggcgcaggatagggcgtcg
caggatagcgcggcactgttacaaaaccagaaattggcccgcgaggcgcacttagccttt
ttacagagccgtgagcaggggctcaaactggccgatgcgctgttaaaagcgcaattgtcc
cagacgacacaaatggggtctgttgccccccatgttaccaccagcgccaataccgctgcg
gcgcagcacgctgtacccgtcccagaactaaaacctgatcacgcgaatgtcgttccctat
acaccacctatcccagcggctaagccctgcatttggaactatcaggatctggtggaatac
gccgagggcgacattgccaaggtctttggcgccgattacgccattatcgatagctacgca
cgccgggtgcgtctgccaacctcggattatctgctggtctcgcgggtgactaagctcaac
gcgcaaatgaaccgctatcagccgagcactatgaccacagagtacgacattcccgtggat
gcgcccttcttggtcgatggccaaatcccttgggcggtggcggtcgaatcgggccaatgc
gacttaatgctgatcagctacttaggtatcgattttgaaaacaaaggcgagcgcgtctat
cgcctgctcgactgcaccctcaccttccttggggatctgccccgcggtggcgacaccctg
cgctacgatatctccatcaaccactttgcccgcaatggcgataccctgctgtttttcttc
tcctacgaatgtttcgtgggcgataagctgatcctaaaaatggacggcggctgcgcggga
ttctttaccgataaagaactggccgatggcaaaggggtgatccgcaccgaggccgaaatt
aagctgcgcgagcaagcacaaattgcactggccaatgaatatgcgcgaaacggcaatcag
ccacgcttcactcctctactaaactgcgcacaaacggcctttagctacggccaaatccat
cgtctactgagcgccgacattggcggctgtttcggcggtgaacatgcggcccatcaggcg
aagtttggtctccaaccttcactgtgcttcgcctcggaaaaattcctgatgatcgagcaa
gtcagtaaactcgacgtgcatggcggcgcttggggcttaggcttgattgaaggtcacaag
caattagcccacgaccattggtatttcccctgccatttcaagggcgaccaagtgatggct
ggctccctcatggccgaaggttgtggccagttactgcaattctttatgctgcatattggc
atgcaccttggggtgactaacggtcgtttccaaccccttgaaaacgcatcgcaaaaagtg
cgctgccgcggtcaggtattgccacaatctggcacgcttacctatcgcatggaagtcacc
gaaattggcatgagccctcgcccctatgccaaggcgaatatcgatattctgctcaatggt
aaagtggtggtggatttccaaaacctcggggtgatgattaaagaagaagcggattgcacc
cgctattcgcacagcagttcttcacaaagccattcttcactgagcaatgattcgcaagca
gcaaatatcgcaatcctcgcggaacaagcgccgctgatggcgcaaatcccagatatggcc
gctcccgtaaataaaggcgttgtgccactaaaacatgtgagtgcgccgattgcgccagca
ggctctaagtacgccaaccgcgtgcccgacaccctgccgtttacgccttaccatttgttt
gagtttgccaccggcgatattgaaaactgcttcggcaccgattttagtatttaccgtggt
ttaatcccgccgcgcacgccctgcggcgatctgcaactcaccacccgcgtggtggccatt
gagggcaaacgtggcgagctgaaaaagccatcctcctgtattgccgagtatgaagtgccc
agcaacgcgtggtattacgctaaaaacagtcacccgagcgtgatgccttactcagtgttg
atggaaatttccctgcaacccaatggttttatctcgggttatatgggcacgaccttaggc
ttcccggggcaggaattattcttccgcaacctcgacggcagtggcaagttactgcgcgaa
gtggatttacgcggtaagaccatagtcaacgattcgcgcctgctgtccactgtgattgct
ggcagtaatatcattcaaaactttagtttcgaactgagctgcgatggcgagcccttctac
cgtggtaatgcggttttcggttactttaaggccgatgcgcttaaaaaccagttggggatc
gacaatggtaaaatcacccaagcctggcacattgagcgcggtatcaaagccgatagccaa
atcaatctgttagataaaaacggacgcagttttgtggcgccgcagggcaaaccatactac
cgcctcgcgggtgggcagctgaactttatcgataaagccgagattgtaaaaactggcggt
aagaaggggctgggatacttgtacgccgagcgcactattgacccaagcgattggttcttc
cagttccatttccatcaggaccctgtaatgccaggctccctaggcgtcgaggcgattatc
gaattactgcaaacctatgccatagaccaagacctaggcgcaggcttcaataatccgaaa
tttggccaaattctgtcagaaattaaatggaagtatcgcggtcaaattaatccattaaac
aaacagatgtcgctggatgtgcatatcaccagtattgaagataaagacggtaaacgcatc
atcaagggcgatgccaacctgagtaaggatggcctgcgcatttatgaggtgaccgatatt
gctatctgcatcgaagaggcataa
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