Shewanella sp. LZH-2: JM642_13635
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Entry
JM642_13635 CDS
T10525
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
shel Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shel03000
]
JM642_13635
Transcription factors [BR:
shel03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
JM642_13635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_13_2
HTH_Tnp_1_2
TetR_C_11
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
QRK78338
LinkDB
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Position
complement(3082730..3083341)
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AA seq
203 aa
AA seq
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MARSCNFDRQEKLIQAMELFWQKGFAETSIADLVEHLGINRFSLYNSFGDKQSLYRECLR
FYLDHYSFGAKEKILHAQAGLNEILTYLARFVALQREQEYGCFMQNAVLEKCLDDDCVQQ
ECQRLFAQLQTHFTGVLRYSQRQGELSQSVQPESLAAFLVLQLQGIRVLGKAKEYTLLDN
AFTVLSEYLKSLALTPLKPVYVK
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcagttgtaattttgataggcaagaaaagctcattcaggcgatggagctattt
tggcagaagggatttgccgagacatcgattgccgatctggtcgaacacttagggattaat
cgcttcagcttgtataacagttttggtgataaacagagtttatatcgtgaatgtttacgt
ttttatctcgaccattattcctttggggcgaaggagaaaatcctgcatgcacaggcggga
ttaaatgagatcttgacctatttagcgcgatttgtggccttgcagcgcgagcaagagtat
ggctgctttatgcagaatgcagtattagaaaaatgtctcgatgatgactgcgtgcagcaa
gagtgccagcgcttatttgcccagttgcagactcacttcaccggtgtattacgctacagt
cagcgacagggtgagttatctcaatcggttcagcctgagtcgctagcggcttttttagtg
cttcaattacaagggattagagtgttaggtaaggcgaaggaatacaccctgttggataat
gcatttacggtattaagcgaatatcttaagagtctcgcgctgacgccacttaagcccgtc
tatgtgaaatag
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