Shewanella sp. LZH-2: JM642_13810
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Entry
JM642_13810 CDS
T10525
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JM642_13810 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shel03400
]
JM642_13810 (xseB)
Enzymes [BR:
shel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JM642_13810 (xseB)
DNA repair and recombination proteins [BR:
shel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JM642_13810 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TACC_C
DUF6687
DUF6730
Motif
Other DBs
NCBI-ProteinID:
QRK78371
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All DBs
Position
3128946..3129185
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AA seq
79 aa
AA seq
DB search
MAKKPENLSFEESLGELERIVAELEQGDVSLDDALKQFERGINLVRNSQAKLEQAQQKVA
ILLKQDENAPLSPYAVEGE
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaagaaacccgaaaatctcagttttgaagaatcccttggtgaactcgagcgcatc
gttgctgagttagagcagggcgatgtctctctcgatgatgcgttaaaacaatttgaacga
ggcatcaatctggtgcgtaacagccaggcaaaacttgaacaagctcagcaaaaagtggcc
attttactcaagcaggatgaaaatgcgcccctatctccctatgccgttgagggcgaataa
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