Shewanella sp. LZH-2: JM642_14460
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Entry
JM642_14460 CDS
T10525
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
shel Shewanella sp. LZH-2
Pathway
shel02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JM642_14460 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shel02000
]
JM642_14460 (lptF)
Transporters [BR:
shel02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
JM642_14460 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Phage_capsid_2
Motif
Other DBs
NCBI-ProteinID:
QRK78489
LinkDB
All DBs
Position
complement(3283437..3284549)
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AA seq
370 aa
AA seq
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MIVFRYLIREVLKAQIAVLFVLLTIFISQHFVRILADASDGEFPASLIATLIGLNLPYLV
VLVLPLSLFLGILMAHGRMYAENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYV
APWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELEKVFVAQLPD
PNDEIGLTNVVVAKGGRVNEDQNGSQQLQLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQ
QVDERRRKLSALPLADLMKVEGSEAVAEFHWRLAIPLAIPIMTLIAVPLARVNVRQGKFA
KMLPAVLLYLGYFGLMVAGRKALQDGVIPQYLGMWWIHLSALIMGILLLGKDRPLFARLS
AAMARKKVAA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtatttagataccttattcgagaagttttaaaggcgcaaattgcggtacttttt
gtactgttaactatttttattagccagcatttcgtgcgcatattagccgacgcctcagac
ggtgaatttcccgcttctctcatcgccaccttgataggccttaatttaccctatctggtt
gttctggttttacctttaagcttattccttgggatattaatggcccatggtcgcatgtat
gccgagaatgaaatggtcattctgcacggtgttggtgtgagtgaatggtatgttactcga
gtaactttgatcctcgccgttattaacatgttgtttactggatatttatccctttatgtt
gcgccttgggcggaggagcaacaaaaccaagtgctggagaaagcacaatctgaagcaggc
cttgccgcgctcgtgcaagggcgttttcaggccagccccaatggccgtgcggtactgttt
gtcgaacgcattggcaaggataatgagcttgaaaaagtattcgtggcccaactccccgat
ccaaatgacgaaattggcttgactaacgtcgttgttgccaaggggggacgcgttaatgaa
gatcaaaatggctcacagcagttacaactcaatgatggggtgcgttatcagggcagccca
caacaaaaagactaccaaatgattgaatttggtggctataagatgcaaatcaaagaacaa
caggttgatgaacgtcgccgtaaactttcagctttaccgctggcagacttgatgaaagtg
gaaggttctgaagccgtagctgagtttcattggcgtctagcaattccgttggcgattcct
attatgaccttaattgcagtgcctttggctcgggtcaatgtgcgacaaggcaagttcgcc
aaaatgctccccgctgttctcttgtacctaggttattttggtctgatggttgcgggtcgt
aaagcgctccaagatggcgttattccacagtatttaggcatgtggtggatccatttgtcg
gcactgattatggggattttactgctcggtaaagacaggcccctatttgcccgtttatca
gcggcaatggcgcgtaaaaaggtggctgcatga
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