Shewanella sp. LZH-2: JM642_14875
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Entry
JM642_14875 CDS
T10525
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00250
Alanine, aspartate and glutamate metabolism
shel00310
Lysine degradation
shel00350
Tyrosine metabolism
shel00650
Butanoate metabolism
shel00760
Nicotinate and nicotinamide metabolism
shel01100
Metabolic pathways
shel01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JM642_14875 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JM642_14875 (gabD)
00310 Lysine degradation
JM642_14875 (gabD)
00350 Tyrosine metabolism
JM642_14875 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
JM642_14875 (gabD)
Enzymes [BR:
shel01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
JM642_14875 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
JM642_14875 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
JM642_14875 (gabD)
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GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QRK78569
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Position
complement(3374886..3376334)
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AA seq
482 aa
AA seq
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MLLKDPSLLRQQCYINGQWCDAQSKETVAIANPATGAVIASVPVMGQAETQAAIAAAEAA
LPAWRALTAKERGAKLRRWFELLNENSDDLALMMTTEQGKPLAEAKGEVTYAASFIEWFA
EEAKRVYGDTIPGHQGDKRIMVIKQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMVVK
PAPQTPFTALALAVLAERAGIPAGVFSVITGDAIGIGNEMCSNPIVRKLSFTGSTQVGIK
LMEQCAPTLKKLSLELGGNAPFIVFDDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQEG
VYDEFARKLSIAVGKLKVGEGITEGVTTGPLINRAAVEKVQSHLEDALSKGATVVAGGKP
HSLGGNFFEPTVLTHVDSSMRVAREETFGPLAPLFKFTDVDDVIKQANDTEFGLAAYFYG
RDISLVWKVAEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKFGIEEYLEIKYICM
SV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgttgttaaaagacccgagtctgctgcgtcagcaatgttatatcaatggtcagtggtgc
gatgcgcagtcaaaagaaactgtcgctatcgctaatcccgcgacgggcgcggtgatcgca
agcgtccctgtgatggggcaagccgaaacgcaagcggcgattgcggcagctgaagcggcg
ttgcctgcatggcgagcacttactgcaaaagagcgtggtgccaagctgcgtcgctggttt
gaattactcaatgaaaacagtgatgacttagcgttaatgatgaccactgagcagggcaaa
ccccttgccgaagctaagggggaagtcacctacgccgcctcctttatcgaatggttcgcc
gaagaagcgaaacgcgtctatggcgatacgattcctgggcatcagggcgataaacgcatc
atggtgatcaagcagcccgtgggcgtgaccgcggctattaccccttggaacttcccagcg
gcgatgattacccgtaaagccgcgccagcactggctgcgggttgtactatggtggtgaaa
cctgcgccgcaaacgccttttaccgcattagccttagccgtgctggccgagcgcgccggg
atccccgctggggtattcagtgtgatcaccggtgatgctatcggcattggtaatgagatg
tgcagtaacccaatcgtgcgtaagttgtctttcaccggctcgacccaagtgggcattaag
ttgatggagcaatgcgcgccgacgctgaagaaattatctttagaattaggcggcaacgcg
ccatttatcgtattcgatgatgccaatatcgatgcggcggttgaaggcgccatgatcgct
aagtatcgcaatgcggggcaaacctgtgtctgcgctaaccgcatttatgttcaggagggc
gtgtatgatgaatttgctcgcaagctcagcattgccgtgggcaaattaaaggtgggcgag
gggattactgaaggcgtcactacgggaccgcttatcaatcgcgcggcggtagaaaaagtc
cagagccaccttgaggatgcgctcagtaaaggggcgacagtagtcgcgggcggtaagccc
catagcttaggcggcaacttcttcgagcccacggtactgacgcatgtcgatagcagtatg
cgcgtggcccgtgaagaaacctttggcccactggcgccgctgtttaagtttaccgatgtg
gacgatgtgattaagcaagccaatgataccgagtttgggttagcggcttatttttatggc
cgtgatatctccttagtgtggaaagtggccgaggcattggaatacggcatggtaggtgtc
aacactgggttgatctccaccgaagtcgcgccgtttggcggaatgaaatcctcagggctc
ggccgagaaggctctaagttcggtatcgaagaatatttagaaatcaaatatatctgtatg
tctgtttaa
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