Shewanella sp. LZH-2: JM642_15175
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Entry
JM642_15175 CDS
T10525
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
shel Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shel03021
]
JM642_15175 (nusA)
03009 Ribosome biogenesis [BR:
shel03009
]
JM642_15175 (nusA)
Transcription machinery [BR:
shel03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
JM642_15175 (nusA)
Ribosome biogenesis [BR:
shel03009
]
Prokaryotic type
rRNA transcription factors
JM642_15175 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_NusA_1st
KH_NusA_2nd
HHH_5
S1
KH_NusA_C
DUF2187
KH_KhpA-B
Glyoxalase_4
S1_RRP5
KH_2
McpB_HAMP_2
Motif
Other DBs
NCBI-ProteinID:
QRK78623
LinkDB
All DBs
Position
complement(3449461..3450960)
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AA seq
499 aa
AA seq
DB search
MNKEILLVAEAVSNEKAVPREKIFEALETALATATKKKYEGDIDVRVAIDRKTGAYETFR
RWMVIDDNGVALENPYREITLEAARFEDPEIQPGEFIEDQIESVAFDRITTQTAKQVIVQ
KVREAERAQVVEQFQDKEGELITGVVKKATRESVVVDLGNNADGVLFREDLISRESFRPG
DRVRALLYSVRPEARGAQLFLTRTKPDMLIELFRVEVPEIADELIEVMGAARDPGARAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQYVINAMAPADVASI
IVDEDNHSMDIAVEAESLAQAIGRNGQNVRLATQLTGWELNVMTVEDMNKKHQAESAKVK
SLFMKSLDVDEDFAQVLADEGFTSLEEVAYVPVSELLAIDGFDEDLVEALRERAKAAIST
RALASEEALDGVEPSEELLALEGVERHLAYVLASKGIVTLEDLAEQGIDDLIEIEELTEE
KAGELIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattctgctagtcgctgaagcggtttcaaatgaaaaggccgttccacgc
gagaagatttttgaagcgctggagactgctctggctaccgctaccaagaaaaaatacgaa
ggtgatatcgacgttcgtgttgctatcgaccgtaaaactggcgcttatgaaactttccgc
cgttggatggtaattgatgacaacggtgttgcgttagaaaatccataccgtgagattacg
ctggaagcagcacgtttcgaagatccagagattcaaccaggtgaatttattgaagaccaa
attgaatcagtggcgttcgatcgcattactacccaaaccgctaagcaagtgatcgtacaa
aaagtacgtgaagctgagcgtgcgcaagtggttgagcagttccaagataaagaaggtgag
ctgatcactggtgtcgttaagaaagcaacccgcgaaagtgtagttgtggacttaggcaac
aatgctgatggcgtattattccgtgaagacttgatttcacgcgaatctttccgtcctggt
gatcgtgttcgtgcattgctttactctgttcgtcctgaagcgcgtggtgcgcagttattt
ttaactcgcactaagcctgacatgctgattgagctgttccgtgttgaagtgccggaaatt
gccgatgaactgatcgaagtgatgggcgcggcgcgtgaccctggtgctcgcgctaagatc
gcagtgaaatcgaacgatcgtcgtatcgacccaattggtgcttgcgttggtatgcgtggg
gcacgtgtgcaagcggtatcgaatgaactcggtggtgagcgtgttgatatcgtattgtgg
gatgataatccagcacaatatgtgatcaacgccatggcgccagctgatgtggcttctatc
atcgttgatgaagacaatcactcaatggatatcgctgttgaagcggaaagtttagctcag
gccattggtcgcaatggtcaaaacgtgcgtttagcgactcagttaacaggctgggaactg
aacgtgatgacagtggaagacatgaataagaaacaccaagccgaaagcgctaaggtgaag
agcttatttatgaaatctctggatgtagatgaagattttgcacaagtactggctgatgaa
ggttttacttcgctcgaagaagtggcttatgtacctgtgtcagaattattggcaattgat
ggctttgatgaggatctcgtcgaagcattacgtgaacgtgctaaggctgcgatctcaact
cgagcgctcgcatccgaagaagcactagatggtgtggagccaagtgaagagttattagca
cttgaaggtgttgaaagacacttagcctatgttttagcgagcaaaggtatcgtgactcta
gaagacttggctgaacaaggcattgatgatttgatcgaaattgaagaattgacagaagaa
aaagcaggtgagctgatcatggctgcccgcaacatctgttggtttggcgaagaagcataa
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