Shewanella sp. LZH-2: JM642_15380
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Entry
JM642_15380 CDS
T10525
Symbol
rlmH
Name
(GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
shel Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shel03009
]
JM642_15380 (rlmH)
Enzymes [BR:
shel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
JM642_15380 (rlmH)
Ribosome biogenesis [BR:
shel03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JM642_15380 (rlmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
Motif
Other DBs
NCBI-ProteinID:
QRK78652
LinkDB
All DBs
Position
3483535..3484005
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AA seq
156 aa
AA seq
DB search
MKLQLIAVGTRMPDWVTRGFEEYQRRFPRDMALELIEIPAGKRGKNADIARILQKEGEQM
LAAIPKGNHIVTLDLPGKNWTTPELATAMNKWQLDGRDVSLLVGGPEGLAPACKEAAHQS
WCLSALTLPHPLVRIVVAESLYRAWSVNTNHPYHRE
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgcaacttatcgcagtggggacacggatgcccgattgggttacccgcggtttt
gaagagtatcaacgccgctttcctcgggatatggcgctggaacttatcgaaatccctgct
ggtaaacgcggaaaaaatgctgacatcgcacgcatcctgcaaaaggaaggcgagcaaatg
ttagcggcgattcctaagggcaatcacattgttaccttagatcttcccggcaaaaactgg
actacgccagaattagcgacagccatgaataaatggcaactcgatggtcgtgatgtgagc
ttactggtcggcggccccgaaggcttagcgcccgcctgtaaggaagccgcccatcagagt
tggtgcctgtcggcattgaccctgccccatcctctggtgcggattgtggttgccgaaagc
ttataccgcgcgtggagcgtgaacactaatcacccttatcacagagaatag
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