Shewanella sp. LZH-2: JM642_15385
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Entry
JM642_15385 CDS
T10525
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00550
Peptidoglycan biosynthesis
shel01100
Metabolic pathways
shel01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JM642_15385 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JM642_15385 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shel01011
]
JM642_15385 (mrdA)
Enzymes [BR:
shel01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JM642_15385 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
shel01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
JM642_15385 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QRK78653
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Position
3484066..3485922
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AA seq
618 aa
AA seq
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MSPKKRITMHDHAAEASLFKRRALFTFVCVVALLSVLVTNLYHLQVESYKDYETRSNDNR
IRVVPIAPSRGLIYDRNGVLLAENQPFYSLDLVPEKIANMSETLDELGKLIEITPDERET
FTEALKFHRRFKPLTLKNQLTEEQVAIFSVNQHRFPGISVEAGLKRNYPYASQLTHVLGY
VGKINTRDRAQLERNDQWKNYAATKDIGKQGIEKYYESLLHGTPGHLEEEVNNRGRTIRT
LKIVPPEPGQDIYLTLDLQLQQKAVELLQGHKGSIVAIDPRDGGILALVSSPSYDPNQFV
QGINSKDYSDLLNDKSRPLINRATQGQYAPASTIKPIIALLGLDEKAVTEHTRIWDPGFW
QIPGVERKYRDWKRWGHGWVNVYSAIVESCDTYFYELAYKIGVDPIARFMEQFGFGQNTG
VDIFEESAGNMPSKEWKRLKYNQAWYIGDTISVGIGQGYWTATPLQLANATAILANKGRR
FPPHLLRSIKDNTAKIDSPINELPPIELKNPRNWNIINEAMRQTAHKSRFTDASYTAAMK
TGTAQVIGVAENTKYDANKIAEHFRDNALVVAYAPFEDPKIVLAVVMENAGWGGANAGPV
ARAMLDEYMLRDTWKPTP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgccaaaaaagcggataaccatgcacgaccacgccgccgaggcgtcactgtttaag
cgtcgtgcgctgttcacttttgtttgtgttgtcgccctccttagtgtgttggtgaccaat
ctttatcatcttcaggttgaatcctataaagattatgaaacgcgctctaatgataaccgc
attcgtgtcgtgcctatcgccccaagccgtggcttgatttacgacagaaacggcgtgtta
ctcgccgagaaccaacccttttattctctcgacttagtgccggagaaaattgccaatatg
tccgagaccttggacgaattaggcaagttaatcgaaatcactcccgatgagcgtgaaacc
tttaccgaagcgctaaagtttcaccgccgctttaagcccttaacccttaaaaatcagttg
accgaagaacaggtcgccatttttagtgttaaccaacatcgctttcctgggatttccgtt
gaggcgggtttaaagcgtaactacccctatgcgagccagctcacccatgtgctgggctat
gtaggtaaaatcaacactcgagatcgcgctcaattggagcgtaacgatcagtggaaaaac
tatgcagccaccaaggatattggtaagcaaggcattgaaaaatattatgaatcactcctt
cacggtacaccaggtcatctcgaagaagaagtaaacaaccgcggccgaactatccgtacg
cttaaaattgtaccgccggagccggggcaagatatttacttaactctcgatttacaatta
cagcaaaaagccgtggaactactccaaggccataaaggctcaatcgtcgctatcgatcca
agggatggcgggattttagctttagtgtcgagcccaagttacgatcccaaccagttcgtg
caagggattaacagcaaggattacagtgatttattgaacgacaaatcacgtccgctgatt
aaccgcgccacccaaggccaatatgcgccagcatcaacgattaaacccattattgcctta
ctgggacttgatgaaaaagccgtgaccgaacacacccgtatttgggaccctggtttttgg
caaatcccaggggttgagcgtaaatatcgcgactggaaacgctggggccatggctgggtt
aacgtctatagtgctatcgtggaatcctgcgatacctatttctatgaattagcttataaa
atcggtgttgatcccatcgcccgttttatggagcaattcggctttggccaaaatactggt
gtcgatatttttgaagagtcggcgggtaatatgccgtcgaaagaatggaagcgcttaaaa
tacaatcaagcttggtacataggagacaccatttcagtcggtatcggccaaggttactgg
accgcaaccccgttacaactggccaatgctaccgctattctcgccaataagggccgccgt
tttccgccgcacttattaagatcgattaaagataatacggccaaaattgactcgccgatt
aacgagttaccaccgattgagcttaaaaatccgcgcaactggaatatcattaacgaagcc
atgcgccaaaccgcccataagtctcgcttcaccgacgcaagctataccgcggcgatgaaa
accggtacggcgcaggtgattggcgtggccgaaaacacgaaatacgatgctaataagatt
gcagagcatttccgcgataacgcactcgtcgtcgcctacgcgccctttgaagatccgaaa
atcgtgctggctgtggtaatggaaaacgccggctggggtggcgcaaacgctggccccgtc
gctcgcgctatgctcgatgaatatatgctcagagacacttggaaaccaacgccatga
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