Shewanella sp. LZH-2: JM642_16145
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Entry
JM642_16145 CDS
T10525
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00630
Glyoxylate and dicarboxylate metabolism
shel00680
Methane metabolism
shel01100
Metabolic pathways
shel01120
Microbial metabolism in diverse environments
shel01200
Carbon metabolism
Brite
Enzymes [BR:
shel01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
JM642_16145 (fdhF)
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GFIT
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NCBI-ProteinID:
QRK78797
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Position
3664804..3669087
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AA seq
1427 aa
AA seq
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MIELRIDNQIVSAEPSDNLLHAARKAGIAIPSLCDPTDASRQLDTQAHAEKQDCNLCLVQ
IENSDASLRCVKACETPAQTGMKVITQSAFLTKQRQAALNTILSDHFADCEAPCQQACPA
GVDVQSYLNHIAQGDHTQAIKVIKDTLPLPLSIGRVCPAFCETECRRGLVDDPIAIRQLK
RHAADLDLADDEHGNSYQPPRLADTGKKIAIIGAGPAGLSAGYYLSNQGHNVEIFEAMPK
AGGWLRYGIPEYRLPKAILDKEIELLCRNGLIIHTQTRLGHEVHLAQLVTDFDAVCLAIG
AQKAVPMNYKGSELAGCYLGVDFLKDHCLDKQLKLGKKVAVIGGGNTAIDCARTAVREGC
DVTLIYRRTRAEMPAEAYEVHEAEVEGVKFHFLTNPIENHSDANGHVQSVTFSKMALGEA
DASGRRAPVDTGETFTEAFDTVIAAVSQAPDLSFMQDSMGQLSHGELALSRWNTLIGCEQ
TMSSGVEKLFVMGDARRGPATAVAAIGDGRKAAKAIDKMLQIGLSCDLHAHDFNSVKTIP
SALKQAKTTSEAAPTLYPHTPRQPRLKMPELTALQRLLNYSEVELGFPADAAMQEAARCL
ECACQANTDCKLRDYATDYGVESKSLATENARHFSVDKSSPFIQFDANRCISCGKCVDVC
QQQSGHCAIQFTEDSYQALPQEISQSLVRRAPRVGFSASMADSRCVQCGNCVQVCPTGAL
VDARDKRQGDKTALKTASTICTYCGVGCRLDLKIDPNTSRIRHIEGNKDSVVNQGMLCVK
GRFGFDFIHSDKRLTTPLIRKNGELQPCSWPEAIAYVAKRLTEIKQQDGSNAIASLASAK
ATNEDNFVLQKFVRSVLGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDIPSIKDSDVIF
IIGSDTTCAHPIIASKIQQAIMQHGARLIVADPKRVGIAEKAEFYVAHRPGTDVMLLNAI
MAEIIRHDWQDKAYIAERTEGIEGLYAELAKEDYSLENAALITGVKAEDIARIARTIGTA
QKTAVYYAMGITQHTTGHDNVTAISNLQLLCGNIGVSGAGINPLRGQSNVQGACDMGALP
NYFTGYQKVTDIHARMRFENHWQTPLSGEIGVTATHMMHDIAKGKIKALYVMGENPVLSD
PDQAHVLNALSQIEFLVVQDIFLTETAELAHVVLPAAAFVEKRGHFTNTERRVQRLEQAL
ASPGEALPDWQIVQALANAMGANWDYKDEEAIWSEINVLTPQYRGIRWERLTTSAEGKVP
QGIQWPCPDENHPGTPIMHQSQFTRGLGLFTPVSYRLPAEMPCNEYPLTLSTGRLLEQFH
TGTLTRKTPGLDLLGAPKVMISVYDAEQLGINNGDKISLITRRGEIEIDAFVTKRAQAGV
LFLPFHFVEAAANKLTINALDPVAYIPEYKVCAVRVEKVTKRVIEPA
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttcgaatcgataatcagatagtctcggccgagccgagcgataacctatta
cacgcagcccgtaaggcgggtattgctattcccagcctgtgcgatcccactgacgcctca
cggcaattggacacgcaagcccatgccgaaaagcaggactgtaacctttgtctagtacaa
atcgaaaatagcgatgccagtctgcgctgcgttaaagcctgtgaaacccctgcccaaaca
ggcatgaaggtcatcacccaatcggcgtttttaaccaaacagcgccaagcggcactgaac
accatcttgagtgatcactttgccgattgtgaagcgccctgccaacaggcctgccctgcg
ggggtcgatgtacaaagttatctcaaccacattgcccaaggtgaccacacccaagcgatt
aaagtcattaaagacactctgccactgccgctgtcgattggccgtgtctgccccgcgttt
tgcgaaaccgaatgccgccgcggcctcgtcgacgaccctattgccatccgccaactcaag
cgccacgctgccgatttagatttagccgatgacgagcacggcaatagctatcaaccgcca
cgcctcgctgacacgggtaagaaaattgccattataggcgcaggtcctgcgggcttaagt
gcgggttattatctttcgaatcaagggcataatgtcgagatatttgaagccatgcccaag
gcgggcggttggctgcgctacggtattcccgaataccgtttacccaaggcgattctcgat
aaagaaatcgagctgctgtgtcgtaatgggttaatcattcatacccagactcgcctcggc
catgaggttcacttagcccagttggtcaccgacttcgatgcggtgtgccttgcgatcggc
gcccaaaaagcagtgccgatgaattataaaggctcggagctggcgggctgctatctaggg
gtagattttcttaaggatcattgcctcgataagcaattgaagttgggtaaaaaagtcgca
gtcatcggcggcggcaataccgccatcgattgtgctcgtacagcggtacgtgaaggctgc
gatgttactttaatctaccgccgtacccgcgccgaaatgcccgccgaagcttacgaagta
cacgaggccgaagtcgaaggagtaaaattccacttcttaaccaatcccattgaaaatcat
agtgatgccaatggacatgtacagtcggtcaccttcagcaaaatggcgctcggcgaagcc
gatgcttcaggcagacgcgcccccgtggacacaggggaaacctttaccgaagccttcgat
accgttatcgccgcagtatcccaagcaccagacctgagctttatgcaagattccatgggg
caactcagccatggcgagctggcactcagtcgctggaacaccctcattggttgtgagcaa
accatgtcatcgggtgtggaaaaactgtttgtgatgggcgatgcccgccgcggcccagcc
accgcggttgccgccattggtgatggccgaaaagcggcaaaagccattgataaaatgctt
caaattggccttagctgtgatttacatgcccacgattttaactcggtaaaaaccattcca
agcgcccttaagcaagcaaaaacaacatcagaagccgcaccaacgctttatccccatacg
ccacgtcagccccgcttgaaaatgcccgaattaacagcactacaacggctgctgaattac
agtgaagtcgaattgggctttcccgcagatgccgctatgcaagaggcggcgcgttgcctt
gagtgcgcctgccaggccaataccgactgtaaactgagggattacgctacggattacggt
gttgagagcaaaagcttagccactgaaaatgcacggcatttcagcgtagataagagttca
ccctttattcaatttgatgctaaccgttgtattagctgcggcaaatgcgttgatgtgtgc
cagcagcagagcggccactgcgccatccaatttaccgaagattcctatcaggcgctgcca
caggaaatcagtcaaagcctcgtgcgccgcgcgccgagagttggctttagcgcgagcatg
gccgatagtcgctgtgtacaatgtggcaactgcgtgcaggtgtgtcccactggcgcactg
gtcgatgcgcgggacaaacgccaaggcgataaaacagcacttaaaaccgcctcgacgatt
tgtacttactgcggtgtaggctgtcgtctggatcttaaaattgaccctaacaccagtcgc
attcgccatatcgaaggcaataaagactcggttgttaaccaaggcatgttatgtgttaaa
gggcgttttggtttcgattttattcacagcgacaaacgcctcacgacaccattaatccgt
aaaaatggcgaactacaaccttgtagttggcccgaagccatcgcctatgtggcgaaacgc
ttaaccgagataaaacagcaagatggcagcaacgcgatcgctagtctcgcctctgccaaa
gcgactaacgaagataactttgtgctgcaaaagtttgtccgcagcgttcttggtaccaat
aatatcgatcactgcgcccgcctatgccactcatcgacggtaacgggcttacagcagagt
attggtagtggcgcgatgaccaatgatattccaagtattaaggactcggatgttatcttt
atcatcggttcagacaccacctgcgcccatccgattattgcctcaaaaatccagcaggcg
ataatgcagcacggcgcacgattaatcgtggccgatcctaaacgcgtaggcatagcagaa
aaggccgaattctatgttgcccacagaccgggcacggatgtgatgctattaaacgccatt
atggcggaaattattcgccacgattggcaagataaagcctatatcgccgagcgtactgaa
gggatcgagggcctctatgcggaattagcgaaggaggattactccctcgaaaacgccgcc
ctaatcacaggtgttaaagctgaggatatcgcccgcatcgcgcgtaccataggcactgca
caaaaaacggcagtttactacgccatgggcatcactcagcatacgacaggccacgataac
gtcaccgccatttctaacctgcaactactctgcggcaatatcggagtatcaggggcgggt
atcaatccgctacgcggccagagtaatgtgcaaggggcttgtgatatgggtgcattaccc
aactacttcacaggctatcaaaaggtcacggatattcatgccagaatgcgcttcgaaaac
cactggcaaacgccgttatcgggggaaattggcgtcacggcaacccacatgatgcacgac
attgccaagggcaaaatcaaagccttatatgtgatgggtgaaaatccagtgctgagcgat
cccgatcaagctcatgtgcttaatgcactgagtcaaatcgagtttctggtagtgcaggat
atctttttaaccgagacggccgagcttgcccatgtggtcttgcccgccgccgcttttgta
gaaaaacgcggtcactttaccaataccgagcgtcgggtgcagcgactcgagcaagcactt
gcctcaccgggggaagccttacccgattggcagatcgtacaagcgctggctaatgccatg
ggcgcaaactgggattacaaagatgaagaggctatttggtctgaaatcaatgtattaaca
ccccagtatcgcggtattcgttgggaaagattaaccacaagtgcagagggtaaagtgcct
cagggtattcaatggccctgtccggatgaaaatcatccgggaacaccgattatgcaccag
agtcaattcacccgcggtttaggcttatttacgcccgtcagttatcgtcttcccgccgaa
atgccctgcaacgagtacccactgacgctatcaacggggcggctcttagaacaattccac
acaggtacactcacccgtaaaacaccgggactggatttactcggcgcacctaaagtgatg
atttcagtctatgatgccgagcaactcgggataaataatggcgacaaaattagccttatc
acccgccgcggcgagattgagatagatgcctttgtgactaaacgcgcccaagccggtgta
ctgttcttgccgttccattttgtcgaagccgcagcgaacaaactcaccatcaatgcctta
gatcccgtggcttatatccctgaatataaggtttgcgcagtaagagttgaaaaggtgact
aagcgggttatcgaaccagcctaa
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