Shewanella sp. LZH-2: JM642_16270
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Entry
JM642_16270 CDS
T10525
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
shel Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shel03036
]
JM642_16270 (xerD)
Chromosome and associated proteins [BR:
shel03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
JM642_16270 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Integrase_1
Phage_int_SAM_5
PAC2
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QRK78819
LinkDB
All DBs
Position
complement(3693576..3694478)
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AA seq
300 aa
AA seq
DB search
MAKTYQCDPLIDAFLDDLWSSKGLSDNTLSAYRTDLRHFDRYLQSQGLGLCDVGQADVRA
YLAYRVEQQFARTSSARLLSSLRRFYTYLLQAKQIAGDPMALIESPKLSRHLPDSLSESQ
VDRLLGEPNVDDPVECRDKAMLELLYATGLRVSELVGLTMEQMSLRQGLVRIVGKGGKER
LVPMGEVAIAAVEHYLTLARHELLGYVQSDVVFPSKRSQMMTRQTFWHRIKLYASRAGIE
TELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVARARLQELHQQHHPRG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaaacctatcagtgtgatccgcttattgatgcatttcttgatgatctttggtct
agtaagggcttaagtgacaataccttgagtgcctatcgcaccgatttacgccattttgat
cgctatctgcaaagccaaggattgggtttgtgcgatgtgggtcaagctgacgttcgtgct
tacttagcttatcgggtcgagcaacaatttgcccgcactagtagtgcacgtttgctgagt
agtttacggcgtttttacacctatttattgcaggccaagcagattgcaggcgatcccatg
gcactgattgaatcgcctaagttaagtcggcatttacctgattctctaagcgagtcacag
gttgataggttactgggtgagcccaatgtggacgaccccgttgaatgccgcgataaagct
atgcttgagttgttatatgccaccggactgcgggtgagcgagctggtgggattaaccatg
gagcagatgagcttgcgccaaggcttagtgcggattgtgggtaagggcggtaaagagcgt
ttagtgccaatgggtgaggtagcaatagccgccgtagaacattacttaactttggcgcgg
catgaactcttaggctatgttcaatctgacgtggtgttcccttcaaagcgatcgcagatg
atgacgcggcaaaccttttggcatcgtattaagctctacgcgagccgagctggaattgaa
actgaactttcaccccataccttgcgtcatgccttcgccacccatttactcaaccatggc
gccgatcttagggttgtacaattacttttaggtcacagtgacttatcgacaactcaaatc
tatacccatgtggcccgagcgagattacaagagttacatcagcagcatcatccacgggga
tag
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