Shewanella sp. LZH-2: JM642_19400
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Entry
JM642_19400 CDS
T10525
Name
(GenBank) efflux RND transporter permease subunit
KO
K07787
copper/silver efflux system protein
Organism
shel Shewanella sp. LZH-2
Pathway
shel02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JM642_19400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shel02000
]
JM642_19400
Transporters [BR:
shel02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JM642_19400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Wzy_C
K-box
Motif
Other DBs
NCBI-ProteinID:
QRK79400
LinkDB
All DBs
Position
4422533..4425676
Genome browser
AA seq
1047 aa
AA seq
DB search
MLKYIIESSIRQRLMVLIIAIMVTVWGVQELRKTPLDALPDLSDVQVIIKTPYPGQAPKL
VEEQVTYPLSTAMLAVPGAKTVRGFSMFGDSYVYVIFEDGTDIYWARSRVLEYLSQISSR
LPQGVQPSLGPDASGVGWVFEYALVDRSGNLDLSQLKSLQDWYLKLELQSVAGVSEVATV
GGMEQTYQIVLEPDNMAIYKLDIATVKEAIERANSEAGGSVVEMAEAEYMVRAKGYRQTL
ADFREIPLGITSPSGTALLLKDVATVRKGPAARRGIAELDGEGEVVGGIVVMRYGENALS
TIDAVKAKLEELKTGLPEGVEIIPTYDRSQLIQKSVDNLFSKVIEEMLVVGLVCLLFLLH
ARSTLVAVITLPLSILIAFIVMNKMGVNANIMSLGGIAIAIGAVVDGAIVMIENLHKHLE
HFKTEHQREPSVKEHWEIVSAASIEVGPALFFSLIIITLSFVPVFALEAQEGRLFAPLAY
TKTFAMAAAALLSITLVPILMGYFIRGKIPSERSNPISRVLIALYQPSLKLVLKFPKVTL
LIALMALASAWYPMTRMGSEFMPALEEGDLLYMPTALPGISASKAAEVLQQTDRLIKTVP
EVARVFGKVGRAETATDPAPLTMLETTIMLKPHNEWREGMTLDGIINQLQQTVKVPGLTN
AWVQPIKTRIDMLSTGIKTPVGIKITGADVNELQALGTKIEAILSKVPHTKSAYAERSGG
GRYIDITPKLDVAARYGMSLQDIQDVVRYAIGGMDIGESVQGAERYPINLRYPRELRDNI
EKLRELPVITKSGNYLPLRNLADIEITDGAPMLTSENGRLISWVFIDIEGTSIGEYINTA
KQALNAELKMPPRYSYSFAGQYEYMQRVDAKLKQVIPMALGVIFILLMMTFGSTMQASMI
MLSLPFALVGSTWLLYLLDYNISVAVAVGMIALAGVAAEFGVIMLVYLNNAIKHRQEKNL
YHSVEDLKEALIEGAVMRIRPKAMTVATIFFGLLPIMWGAGSGNDVMQKIAAPMVGGMVT
APILSLFVLPALYLLIYSRKLKQDAVH
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatatattatcgagtcctcgatcagacaaagacttatggtgttaattatcgcc
atcatggttactgtctggggcgtgcaggagttgcgtaaaacgccgctcgatgccctgccg
gatttgtccgatgtgcaggtgatcattaagaccccttatccagggcaagcaccaaaactg
gttgaagaacaggtgacctacccattatcgaccgccatgctagccgtacccggtgcaaaa
accgtgcggggtttctcgatgtttggtgactcttatgtgtatgtgatcttcgaagatggc
accgacatctattgggcgcgttcacgggtgttggagtatttaagccagatcagcagtcgc
ttacctcaaggggtacaaccctcactcggccctgatgcctcaggtgtgggctgggtgttt
gagtacgcactggtcgatcgctccggcaacttagatctctcgcaacttaaaagcctacag
gattggtatctcaaactcgagttgcaaagcgtcgcaggcgtatctgaagttgccacggta
ggcggtatggagcagacctatcagatcgtgctcgagccagacaatatggcgatctataaa
ctcgatatcgccaccgtcaaagaggcgatagaaagagccaatagcgaagctggtggttca
gtggtcgaaatggccgaagccgaatatatggtgcgcgccaagggttatcgtcaaacatta
gctgattttcgtgaaatcccattagggattactagcccttccggaacagctttactactc
aaagatgtcgctaccgtgcgcaaaggccccgctgctcgccgcggtattgccgagcttgat
ggcgaaggcgaagtcgtgggcggcattgtggtgatgcggtacggtgaaaacgcgctttcc
actatcgatgcggttaaagctaaactggaagagttaaaaacaggtctgcctgaaggggtg
gaaatcattccaacctatgaccgctctcaattaattcaaaagtctgtcgacaacctattc
agcaaagtcattgaagaaatgttggtagtgggcttggtttgcctattatttttactgcat
gcacgctcaacgttggtcgcggtgattactttaccgctgtcgattcttattgcctttatt
gtgatgaataaaatgggggtgaatgccaatattatgagtcttggtggcatcgctattgcc
atcggtgccgtagtggatggtgcgatcgtcatgatcgaaaacctgcacaaacatttagag
cactttaaaaccgaacatcaacgcgaaccgtcggttaaagaacactgggaaattgttagc
gcagcttctatcgaagtgggccctgcactgtttttctcactgattattatcaccttaagt
tttgtacccgtatttgcgctagaagcgcaggaaggacgcttatttgcgccactggcttac
actaaaacctttgccatggcggcagcggcattattatccattacgctagtgccaattctg
atgggttactttattcgtggaaaaattcctagcgagcgcagtaatcccatcagccgagtg
ctaattgccctgtatcaaccgtcgttgaaactggtgctgaagtttccaaaagtaacccta
ctaattgctttaatggcactggccagtgcttggtatcccatgacacgtatgggcagtgag
tttatgcctgcgctcgaagaaggcgatttactctatatgccaacggcattgccaggcatt
agcgccagcaaagccgccgaagtgctacaacagacggatcgtttgattaaaaccgtccct
gaagtcgctcgcgtatttggtaaggtggggcgggccgaaacggcgacagatcctgcgcca
ctcaccatgctcgaaaccacaatcatgctaaaaccccacaacgaatggcgtgaaggcatg
accttagatggcatcattaatcagttacagcagacggtaaaagtgcctggcctcacaaac
gcttgggtacaaccgattaagacacgtatcgatatgctatcaacgggcattaaaaccccc
gtaggcattaaaattaccggtgcagatgtcaatgagctgcaagccctaggcaccaaaatt
gaggctatcttaagcaaggtcccacacactaaatcggcctatgcagaacggagtggtggt
ggacgctacatcgatatcacgccaaaactggatgttgccgctcgttatggtatgtcatta
caagatattcaggatgtagtgcgttacgccatcggtggtatggatattggcgagtccgta
caaggtgctgagcgttaccctattaacctgcgctatccaagagagctgcgtgacaatatc
gagaaactgcgtgaattacctgtgatcactaaatcgggaaattacttaccacttcgcaat
ttagccgatatcgaaatcaccgatggtgcaccaatgctcaccagcgaaaacgggcgctta
atctcttgggtatttatcgatattgagggcacttctattggggaatacattaacaccgcg
aagcaagctttaaatgccgaactcaaaatgccgccccgttatagctacagctttgcgggc
cagtacgagtatatgcaacgggtcgatgccaaactaaagcaagtcatcccaatggcatta
ggagtcatctttatcctactgatgatgacctttggctctaccatgcaagcgagcatgatc
atgctgagtctaccctttgccttagtcggcagcacttggctattgtatctactggattac
aacatctctgttgccgtcgctgttggtatgattgcccttgctggggtagcagcagaattt
ggggtgattatgttggtctatttaaataacgccatcaaacatcgacaggagaaaaacctt
taccacagcgttgaagacttaaaagaagccttgatagaaggtgcggtcatgcggatacgt
cctaaagcgatgacagttgccaccatcttcttcggcctactccccattatgtggggcgca
ggttcgggtaacgatgtgatgcaaaaaatcgccgccccaatggtcggcggaatggtaaca
gcaccaatactgtcgttgtttgtactgccggcactgtatcttctcatttactcgcgtaaa
ttaaagcaagacgcagttcactga
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