Shewanella sp. LZH-2: JM642_20290
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Entry
JM642_20290 CDS
T10525
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
shel Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shel03016
]
JM642_20290 (mnmE)
Transfer RNA biogenesis [BR:
shel03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
JM642_20290 (mnmE)
Prokaryotic type
Methyltransferases
JM642_20290 (mnmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Ras
Dynamin_N
AIG1
ABC_tran
Gtr1_RagA
AAA_28
Roc
DUF4702
MMR_HSR1_Xtn
Arf
SRPRB
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QRK79566
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All DBs
Position
complement(4630263..4631624)
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AA seq
453 aa
AA seq
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MTTDTIVAQATAPGRGGVGIIRISGDKATDVAMAVLGHLPKPRYADYCDFKNASGQVIDQ
GIALFFKGPNSFTGEDVLELQGHGGQIVLDMLIKRVLEVKGIRIAKPGEFSEQAFMNDKL
DLTQAEAIADLIDATSEQAAKSALQSLQGEFSKEVHELVDQVTHLRLYVEAAIDFPDEEV
DFLSDGKIANALYKIIDKLSAVQASAKQGSIIREGMKVVIAGRPNAGKSSLLNALAGKES
AIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTTDTVEQIGIERAWNEINSADRVLF
MVDGTTTDAVDPHDIWPDFIDRLPTNLGVTVVRNKADLTGENLEMTEEKGYSVYRISAKT
GLGVEELKQHLKSLMGYQSNLEGGFIARRRHLEALDVAASHLQLGKEQLEVYLAGELLAE
ELRMAQLALSEITGRFTSDDLLGKIFSSFCIGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgacaactgacactatcgtggcacaagccaccgcgcccggacggggcggcgtgggtatc
attcgaatctctggtgataaggcaaccgatgtggccatggccgtattgggtcatttacct
aaaccccgttacgccgattactgcgactttaaaaatgcctcaggccaagtgatagaccaa
ggtatcgcactgttttttaaaggccctaattccttcacgggtgaagatgtattagagctg
cagggccacggtggtcaaatcgtcctcgatatgctgatcaagcgcgtattagaagtcaaa
ggcattcgcatcgccaaacctggtgagtttagcgaacaggcctttatgaacgataaacta
gacttaacccaggccgaagccattgccgaccttatcgatgccaccagtgagcaagccgcc
aaaagcgctctgcaatcactgcaaggtgagttttcgaaggaagtgcatgagctggtggat
caagtcacccatctgcgtttatacgtcgaagccgcgattgatttccccgatgaagaagtc
gactttttaagtgatggcaaaattgccaatgcactctacaaaatcatcgacaaactcagc
gccgtccaagccagtgccaagcaaggctcgattatccgcgaagggatgaaggtggtgatt
gccggtcgccccaatgccggaaaatccagtctacttaatgcgctcgccggtaaagagtcg
gccattgtgaccgaaatagctggcaccactcgcgatgtgctgcgcgaacacattcattta
gatggtatgccactgcatattatcgacaccgcaggtttacgtgataccacagatacggtt
gaacaaatcggtatcgagcgcgcttggaatgaaatcaacagtgccgatcgggtgttgttt
atggtcgatggcaccaccacggatgccgtcgatccccacgatatttggccggattttatc
gatcgtctccccaccaatttaggcgtgaccgttgtccgcaataaggccgatctcaccggt
gaaaacctcgagatgactgaagaaaaaggctatagcgtgtataggatctcggccaaaacc
ggtctgggcgtagaggaattaaagcaacaccttaaatccttgatgggttatcaaagcaac
ctcgaaggtggctttatcgcccgtcgtcgtcacctcgaagcattggatgttgccgcaagc
catctgcaactaggtaaagagcaattagaggtttatctcgcaggtgaactgttagcagaa
gagctcagaatggcgcaactcgccctgtctgaaatcactggccgttttacttcagacgat
ctactcggcaaaatttttagctcattctgtattgggaagtaa
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