Shewanella sp. MTB7: HWQ47_00160
Help
Entry
HWQ47_00160 CDS
T10730
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
shem Shewanella sp. MTB7
Pathway
shem00071
Fatty acid degradation
shem00280
Valine, leucine and isoleucine degradation
shem00310
Lysine degradation
shem00362
Benzoate degradation
shem00380
Tryptophan metabolism
shem00410
beta-Alanine metabolism
shem00640
Propanoate metabolism
shem00650
Butanoate metabolism
shem00907
Pinene, camphor and geraniol degradation
shem00930
Caprolactam degradation
shem01100
Metabolic pathways
shem01110
Biosynthesis of secondary metabolites
shem01120
Microbial metabolism in diverse environments
shem01200
Carbon metabolism
shem01212
Fatty acid metabolism
Module
shem_M00087
beta-Oxidation
Brite
Enzymes [BR:
shem01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HWQ47_00160 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HWQ47_00160 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HWQ47_00160 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HWQ47_00160 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WBJ95586
LinkDB
All DBs
Position
complement(37985..40135)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIARLCFNAAGSVNKLDRETIDSLNAALDAIKQESKIQALILTSA
KGAFIVGADITEFLGLFAQEDSVLLPWIAEANDVFNKIEDLPFPTISAINGFALGGGFET
VLATDFRIADTTARLGLPETKLGLIPGFGGTVRLPRLIGADNALEWITTGKDHKPEAALK
VGAIDAVVAPENLQASAIAMLKEALAEKLDWQARRAKKQAPLNLPKLEAMMSFATAKGMV
FKVAGKHYPAPMAAIGVIEQAARCKRADALKIEHQAFIKLAKTDVAQALIGVFLNDQFVK
GKAKKAGKLAKKIDTAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALELGLGEASKLL
ATQIKRGRSTPEKMAKVLNNITATLDYIPVKDVDVVVEAVVEHPKVKSMVLAEVEQHVSD
DAIITSNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEVIRGENSSEETVASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFVAIDKVMEKQFGWPMGPAYL
LDVVGIDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFEADRFGQKNSKGFYAYSVDRRGKP
KKDVDPSSYELLGAEFGELKAFESDEIIARTMIPMIIETVRCLEEGIIATPAEADMGLVF
GLGFPPFRGGVFRYIDTMGVANFVALADKYAHLGGLYQVTDAMRELAAKNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacgattcaggttgaattacttgaagacaatattgcccggtta
tgctttaacgctgctggctcagtcaataaactagacagagagacaatagactcactcaat
gctgcattagacgcgattaagcaagagtcaaaaattcaagctctgatcctgacgtcagcc
aaaggcgcttttattgttggtgctgacatcacagagttcctcggtttatttgctcaagaa
gatagtgtacttcttccttggattgccgaagcaaatgatgttttcaacaaaattgaagat
ctaccgttcccaactatctcagccattaacggttttgcactcggcggtggattcgagacc
gtactagcaaccgacttccgtattgctgataccacagccagactgggccttcctgaaacg
aaactgggactaatccctggctttggcggaactgttcgcttacctcgtctgattggtgcc
gataacgcacttgagtggataaccacaggtaaagatcacaagccggaagcagctttaaaa
gtgggcgctattgacgccgttgttgctccggaaaatttacaagcatcggctatcgccatg
ttaaaagaagcccttgcagagaaattagattggcaggctcgtcgtgctaagaagcaggca
ccgctcaatctaccaaaacttgaagctatgatgtcgtttgcgaccgcaaagggcatggta
tttaaggtagcaggtaaacactaccctgcgccaatggctgctattggcgttatcgagcaa
gcagctcgctgtaaacgtgccgatgcgcttaaaatagaacatcaagcttttatcaaactc
gcaaaaactgacgtagctcaggcccttattggtgtgttccttaacgaccagttcgttaaa
ggtaaagcaaagaaggctggcaaactggcgaagaagatcgatacggcagcagtactcggt
gccggcatcatgggtggtggaatcgcttaccagagcgcaagtaaagggacaccgattgtc
atgaaagacatcgcgcaacccgctctcgaacttggtttaggcgaagcatctaagttactt
gctacacaaattaaacgtggccgttcaacgcctgaaaaaatggccaaagtactcaacaat
atcacggcaacactggattacatcccagtgaaagatgtcgatgtggtggtcgaagcggtt
gttgaacatccaaaagttaaatcaatggtacttgccgaagttgagcaacatgtatctgat
gatgccatcatcacttcaaatacatcaactatctctatcaacctactcgctaagagcctc
aagaagcctgaacgcttctgtggtatgcacttctttaatcctgtacataagatgccgcta
gtagaagttattcgcggtgaaaacagctctgaagaaacagtagcatcagttgtggcttat
gccagtaagatgggcaaaacccctatcgttgttaatgattgcccaggcttctttgtcaac
cgcgtactcttcccctactttgcgggcttcagtggcctacttgccgatggcgctgacttt
gttgctatcgataaagtgatggaaaagcaatttggctggcctatgggcccagcataccta
ctcgacgtagtgggtatcgatacgggtcaccatgctcaagctgttatggcggaaggcttc
ccagatcgtatggggaaaaatggtaaagatgctatcgacattatgtttgaagcggatcgc
ttcggacaaaagaacagtaaaggtttctacgcatactcagtagatcgccgcggcaagcca
aagaaagatgtcgacccaagcagctatgagctattaggtgccgaatttggtgagcttaaa
gcttttgaatccgatgaaatcatcgcacgtactatgatccctatgattatcgaaacagta
cgctgtctcgaagaaggcattattgctacgccagctgaagcggacatgggcctagtcttt
ggtcttggtttcccgccattcagaggtggtgtattccgctatatcgatactatgggtgtc
gctaacttcgttgctcttgctgataagtatgctcacctaggtggtctatatcaagtcaca
gatgcaatgcgcgaacttgccgctaaaaatggcagctactatcaagcttaa
DBGET
integrated database retrieval system
