Shewanella sp. MTB7: HWQ47_00210
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Entry
HWQ47_00210 CDS
T10730
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
shem Shewanella sp. MTB7
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shem03009
]
HWQ47_00210 (rsmB)
Enzymes [BR:
shem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HWQ47_00210 (rsmB)
Ribosome biogenesis [BR:
shem03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HWQ47_00210 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_37
Cons_hypoth95
Methyltransf_12
FtsJ
Methyltransf_5
TrkA_N
MTS
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
WBJ95596
LinkDB
All DBs
Position
complement(50749..52026)
Genome browser
AA seq
425 aa
AA seq
DB search
MNLRALAAKVVFQVLEKGISLSVALPEQQKHCESGKDKALLAELSYGVMRQLPQLDKLVS
DCMAKPLKGKQRILHQLLLVGCYQLYFTRIPSHAAISETAEACRQLKFDGLVKVVNGVLR
NIQRQEKPLPTDNDTLMYNTPTWIVKSLKQAYPENWQAVIENSHQRPPMWLRNNMRSQSR
DEYLAQLAEADIPAISGKGSDAILLESPKDVMQLPGFETGAVSVQDGAAQWAATLLAPVD
GELILDACAAPGGKTCHLLERANIELVAVDFDANRLERVQQNLDRLALNAKLVHGDAADI
DAWWSGDKFDRILLDAPCSATGVIRRHPDIKWLRKQADIEELAQLQSKILDHCWQWLKSG
GTLLYATCSILPQENAQQISAFLERTDDATLVAISEQPNSDDIGWQITPGMENMDGFYYA
RLVKG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcgtgcgctggcggcaaaagtcgtttttcaagtgttagaaaaagggatctca
ctctctgtagctctacctgagcaacagaagcattgtgaaagtggtaaagataaagcccta
ctcgccgagctaagttacggtgtaatgcgtcaattaccgcaactagacaagttggtcagc
gattgcatggctaagccactgaaaggtaagcagagaattttgcatcaactgttgctagta
ggttgttaccagctctatttcactcgtatacctagtcatgcggcgatttctgaaaccgcc
gaggcttgtcgtcaattgaaattcgatggccttgttaaggtcgttaacggtgttctgcgt
aatattcaacgtcaagagaagccactgccaaccgacaacgacaccttaatgtataacact
ccgacctggattgtgaagagtctaaagcaagcctacccagagaattggcaagccgtgatt
gaaaacagtcatcaacgtcctcccatgtggttgcgtaacaacatgcgctcccaaagccgt
gatgaatatctcgctcaattagctgaagctgatatcccagcaatatctggtaagggtagt
gatgcgattttactcgagagtcctaaagacgtaatgcaacttccaggatttgagactggt
gccgtttctgttcaagatggcgcagcccaatgggcagcgacattattggctccagtcgat
ggcgagttgatcctcgatgcctgtgcggcacccggcggtaaaacctgtcatctgctcgaa
cgcgctaatatcgaattagtcgcggtcgactttgatgccaaccgtcttgaacgagtgcaa
caaaatctagatcgtcttgcgcttaatgccaaacttgttcatggcgacgctgccgatatt
gacgcttggtggtctggtgataaatttgatcgcatcttacttgatgctccctgctctgcg
accggtgtgatacgtcgccacccagatattaaatggttaagaaagcaggccgatatcgaa
gagttggctcagttacaaagcaaaatattggatcattgctggcagtggttaaagtcaggt
ggcacactcctatatgcaacttgctcaattcttccccaggaaaacgcacaacaaattagt
gctttccttgaaagaaccgatgatgcgacactggttgcgatctcagagcagccaaactct
gatgatataggctggcagatcaccccgggaatggaaaatatggacgggttctattacgca
cgcctagtaaagggataa
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