Shewanella sp. MTB7: HWQ47_00555
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Entry
HWQ47_00555 CDS
T10730
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shem Shewanella sp. MTB7
Pathway
shem03030
DNA replication
shem03410
Base excision repair
shem03420
Nucleotide excision repair
shem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HWQ47_00555 (polA)
03410 Base excision repair
HWQ47_00555 (polA)
03420 Nucleotide excision repair
HWQ47_00555 (polA)
03440 Homologous recombination
HWQ47_00555 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shem03032
]
HWQ47_00555 (polA)
03400 DNA repair and recombination proteins [BR:
shem03400
]
HWQ47_00555 (polA)
Enzymes [BR:
shem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HWQ47_00555 (polA)
DNA replication proteins [BR:
shem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HWQ47_00555 (polA)
DNA repair and recombination proteins [BR:
shem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HWQ47_00555 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HWQ47_00555 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
WHD_GTF3C1_N
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
WBJ95661
LinkDB
All DBs
Position
complement(117215..119974)
Genome browser
AA seq
919 aa
AA seq
DB search
MPKIAENPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVINMLRSLLNQYKPDQMAV
VFDAKGKTFRNDMYEDYKAQRPPMPDDLRTQIEPLHNIIRALGLPLICVSGVEADDVIGT
IATQASKEGRAVLISTGDKDMAQLVDENVTLINTMTNTIMGPAEVTEKFGVGPELIIDLL
ALQGDKADNIPGLPGVGEKTAVAMLTGAGSVAQILAAPEKIPALGFRGSKTMPAKLAEHG
DMLKLSYELATIKLDVEMEQNWKELTITPANKDDLIKYYGEMEFKRWLAEVLDNKTGIAR
TSDDSANEDQVTAQEIATEYETILTHEALDRWIEQLSTAELISIDTETTSLDYMVAKLVG
ISFAVEAGKAAYLPLAHDYLDAPEQLDLEEVLAKLKPLLENPELKKVGQNLKYDISIFAN
IGIKLQGVAFDTMLESYVFNSVASKHNMDDLALKYLGHKTISFEEIAGKGVKQITFNQIP
LEIAAPYAAEDADITLRLHQHLWPRLQKDPKLASVFTDIELPLIQILSDVEREGVLIDSM
MLGQQSQEIAIKIDKLEQDAFEIAGETFNLSSPKQLQVLFFEKLGYPVIKKTPKGAPSTA
EEVLVELALDYPLPKIILQHRSLAKLKSTYTDKLPLMVNAKTGRVHTSYHQANAATGRLS
SSEPNLQNIPIRTEEGRRIRHAFIAQEGKKVLAADYSQIELRIMAHLSQDKGLLTAFAEG
KDIHKATAAEVFGVNFSEVTTEQRRRAKAVNFGLIYGMSAFGLARQLDIPRAEAQKYIDT
YFKRYPGVLKYMEDTRAEAADLGYVSTLYGRRLYLPAIKDRNAMRRQGAERAAINAPMQG
TAADIIKKAMINIAQWIKSDTQGEITMIMQVHDELVFEVDSDKAETLQAKVCKMMADAVS
LDVELLAEGGIGDNWEQAH
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaattgccgaaaatcctctcgttcttgtggatggttcttcatacctctatcga
gcttattatgcaccaccacatttaacaaactctaaaggggaagctaccggggctgtatat
ggcgtgatcaacatgctgcgtagtttacttaatcaatataagccagatcagatggcggta
gtttttgatgcaaagggaaaaaccttccgtaatgatatgtacgaagactataaagcacag
cgtcccccaatgccggacgacctgcgcacgcaaatagagccgctacacaacatcattcgc
gctttaggattgcctcttatttgtgtatccggcgtagaagccgatgatgtgataggaaca
attgcaacacaagcgagcaaagagggacgcgccgtgctgatcagcactggcgataaagat
atggctcagctagtcgatgagaacgttaccttaatcaataccatgaccaatactattatg
ggaccagcggaggtcactgaaaagtttggtgtagggcctgagctaatcattgatctactt
gcacttcagggtgataaagccgataacatcccaggtttacctggtgtaggtgagaaaacc
gcggttgctatgctaacaggtgcgggtagtgtcgcacagatattggcggcaccggagaag
atcccagcactaggcttcagagggtctaaaactatgccagccaaactggctgaacatggc
gatatgctcaaactttcctatgagcttgctaccattaaacttgacgttgaaatggagcaa
aattggaaagagttaaccatcactccagccaataaagatgacctcattaagtattatggt
gagatggaatttaagcgttggttagctgaagtattagataacaagactgggatcgctaga
acctcagacgacagtgctaacgaagaccaagtcacagctcaagagatcgcgacagagtat
gaaacaattctaactcatgaagcattagacagatggatcgaacaactatcaacagctgaa
cttatctccatagacacagagaccacaagtcttgattatatggtcgctaaattggttggt
atctcatttgcagttgaagcaggcaaagccgcttatttaccattagcccatgattatctc
gacgctccagagcagctagatctagaggaagtcctcgctaaacttaaacctttgcttgaa
aacccagaattaaaaaaagtcggtcaaaaccttaagtatgatatcagtatttttgccaac
ataggcatcaaattacaaggtgttgctttcgacactatgctcgaatcttatgtgtttaat
tcagtcgcttcaaaacacaacatggatgatttggcgctgaaatatttagggcacaaaaca
ataagctttgaagagatagcaggaaaaggggtgaagcagatcaccttcaaccagatccca
ctagaaatagcagctccctatgccgcagaagatgccgatattacgttgcgactacaccag
cacctttggcctagattacaaaaagatcctaaactcgcctcggtgtttaccgacatcgag
ttgcctttaatccaaattttatctgatgttgaacgtgaaggcgtactgatcgatagcatg
atgttaggtcaacagagtcaagagatagcgattaaaattgataaactcgagcaagatgct
tttgaaatagcaggtgaaacctttaacttaagctcaccaaaacaactgcaagtcctattc
tttgagaagctcggttaccccgtcattaaaaagacacctaagggagcgccttcaacagcc
gaagaggtgttagttgaacttgctctggactatcctctgcctaagatcatattacagcac
agaagcttagctaagctgaagagcacatataccgacaagctgccgttaatggttaacgct
aaaacggggcgagtacacactagctatcaccaagcgaatgcagcaacgggtcgtttatct
tctagtgagcctaacctacaaaatatcccaattcgtacggaagagggtcgacgcattcgt
cacgcctttattgctcaagagggtaaaaaagtactggcagccgattactctcaaatcgaa
ttgaggatcatggcacacctatcccaagataaagggctattaacggctttcgccgaaggc
aaagatatccataaagcaaccgctgcagaggtatttggtgtcaactttagcgaagtcacc
acagagcaacgtcgccgtgctaaagccgtcaatttcggtttaatctacggtatgtcagcc
tttggactcgctcgtcagctcgatatcccacgcgccgaagcacaaaagtatattgatacc
tactttaaacgctatcctggtgtactcaagtatatggaagacacccgagctgaagccgca
gatcttggctacgtctctactctctacggacgcagattatatcttcctgcgatcaaagat
agaaacgccatgcgccgacaaggagctgaacgtgcagcgattaacgcaccaatgcaggga
actgcagctgacatcatcaagaaagcgatgatcaatatcgcccagtggattaaatcagat
acccagggtgagatcactatgatcatgcaagtacacgatgaattagtctttgaggtcgac
agtgataaagcagaaacactgcaggctaaggtatgcaaaatgatggctgatgccgttagc
ttagatgttgaactcttagctgaaggtggaataggtgacaactgggaacaggcccactag
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integrated database retrieval system
