Shewanella sp. MTB7: HWQ47_02210
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Entry
HWQ47_02210 CDS
T10730
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
shem Shewanella sp. MTB7
Pathway
shem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWQ47_02210 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shem03019
]
HWQ47_02210 (recQ)
03400 DNA repair and recombination proteins [BR:
shem03400
]
HWQ47_02210 (recQ)
Enzymes [BR:
shem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HWQ47_02210 (recQ)
Messenger RNA biogenesis [BR:
shem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HWQ47_02210 (recQ)
DNA repair and recombination proteins [BR:
shem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HWQ47_02210 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HEM4
zf-CXXC
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WBJ95974
LinkDB
All DBs
Position
491428..493254
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AA seq
608 aa
AA seq
DB search
MEQAIDKAQLDPLSLSLQSVFGYRTFRDGQKEVIEQSCSGYDCLVIMPTGGGKSLCYQLP
ALQFPGLTIVVSPLISLMKDQVDSLMQMGVSAAYLNSSLPREQSAKILQQMHSGELKLLY
VSPERLLQGHFIDRLHELHISLFAIDEAHCISQWGHDFRPEYAALGKLREFFPHVPIMAL
TATADQATRKDICDRLTITPYSLLTSFDRPNIRYTVAEKLNAANQLRQFIIAQNGSSGII
YCSSRRRVDEVAERLRLQGHNAEAYHAGRTQEERADVQDRFLKDQLDIVVATVAFGMGIN
KSNVRYVVHYDIPKSVESYYQETGRAGRDGLDSEALLLFDPADIGRVRHLIEQSEPGPQQ
QVEFHKLNTMAAFAEAQTCRRQVLLHYFDESASEPCGNCDICLDPPKRYNGIQDAQKVLS
CVYRLGQRFGINHLIEVLRGSKAATVLDRGHDKLSTWGIGKDKSHEYWLSIIRQIIHLGF
ASQDITRGSSVKLNPSARSVLKGDVELLLAEPRMVLQSTTKRRGSNTRAPLNYDRKLFAR
LKQLRRKLAEELDVPPYLVFNDATLAEMAAILPTSPGEMLAVNGVGERKLSRFGGEFLDE
ISSYLTEG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagcgatagataaagctcaattagatccactctccttaagtctacagtctgtt
ttcggctatcggacattcagagatggtcagaaagaggtgatagaacagagctgttccggt
tatgactgcttggttatcatgccaacggggggcggtaaaagcctctgttatcagttgcct
gctctacagttccctgggttaactatcgtcgtatcgccacttatttcattaatgaaagat
caagttgatagcttgatgcagatgggggtcagcgctgcgtatttaaactcctctttacca
agagagcagagcgctaaaattttacagcagatgcacagtggcgaattaaagctactttat
gtctccccggaacgtttactgcaagggcattttatcgatcggctgcatgagctgcatatc
tccctttttgccatcgatgaagcccactgtatctcacaatggggtcatgattttaggcct
gaatatgctgcactgggtaaactcagagagttctttcctcatgtgcctattatggcgtta
acggcaacagcagatcaggctacccgtaaagatatctgtgatcgattaaccatcacgccc
tattcactgttaactagctttgacagacccaatattcgctacacagtggcagagaagctt
aatgctgcaaatcaattacgccaatttattattgctcaaaatggttccagcggaattatc
tattgcagtagccgccgccgtgttgatgaagttgctgaacgacttaggctgcaaggacat
aatgcagaggcttatcatgccgggaggacccaagaggagcgagcagacgtccaagaccgg
tttctaaaagatcaacttgatattgtcgtggcaaccgtcgcatttggtatgggaattaat
aagtctaatgtgcgttatgtggtgcattatgatattccaaaaagtgttgaatcctactat
caagaaacaggaagagcaggtcgtgatggcctagattctgaagccctattgttattcgat
cctgctgatataggtcgcgtgcgtcatcttatcgaacagtctgaacctggtccacagcaa
caagtggaatttcataagcttaataccatggcggctttcgctgaggcacagacctgccga
cgtcaggtgttactgcactacttcgatgagagtgcttcagagccctgtggcaactgtgat
atctgtttagaccctcctaaacgttataacggtattcaagatgcgcagaaggtgctgtcc
tgtgtctatcgcttaggtcagcgctttggtattaaccatctcattgaggtactaaggggg
tctaaagcggcaacagtactagaccgtggccatgataagttgtcaacttgggggataggc
aaagataaaagccatgaatactggctgagtatcatacgtcagataatacatctgggattt
gccagtcaagatattactcgtggttcctcggttaaacttaacccatcagcgcgatcggta
ctgaaaggtgatgttgagttgctgttagctgagccaagaatggtgctacaaagcacgact
aagcgtcgaggcagtaacacacgtgcaccgcttaactatgaccgtaagttatttgcacgt
ttgaaacagcttaggcgtaagctggctgaagagttagatgtgcctccttatctggtattt
aacgatgccactttagccgaaatggctgcaatattaccaacaagtccaggtgagatgttg
gctgtaaacggtgtaggtgaacgtaagttgagccgttttggtggtgagtttcttgacgag
atcagtagttacttaacagaagggtaa
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