Shewanella sp. MTB7: HWQ47_02950
Help
Entry
HWQ47_02950 CDS
T10730
Name
(GenBank) type I secretion C-terminal target domain-containing protein
Organism
shem Shewanella sp. MTB7
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WBJ96106
LinkDB
All DBs
Position
complement(699934..709689)
Genome browser
AA seq
3251 aa
AA seq
DB search
MAGNTGDVTDTTVLDTSAPGTGDGENQINFLDGGDELVSDAESGSVPLSGQVAVGSTVNS
ITISDGTTTITVNAVDITVAADGTVTVAGQDLSGLEDGTLTVTMNVTDLAGNTGDVTDTT
VLDTSAPGTGDGENQINFLDGGDELVSDAESTSVPLSGQVAVGSTVNSITISDGTTTITV
TAADISVAADGTVTVAGQDLSGLADGTLTVTMNVTDLAGNTGDVTDTTVLDTSAPGTGDG
ENQINFLDGGDELVSDAESTSVPLSGQVAVGSTVNSITISDGTTTITVNAADISVAADGT
VTVAGQDLSSLADGTLTVTMNVTDLAGNTGDVTDTTVLDTSAPGTGDGENQINFLDGGDE
LVSDAESGSVPLSGQVAVGSTVNSITISDGITTITVAAADISVADGSVTVAGQDLSSLAD
GTLTVTMNVTDLAGNTGDVTDTTVLDTSAPGTGDGENQINFLDGGDELVSDAESGSVPLS
GQVAVGSTVNSITISDGITTITVAAADITVAADGSVTVAGQDLSNLADGTLTVTMNVTDL
AGNTGDVTDTTVLDTSAPGTGDGENQINFLDGGDELVSDAESGSVPLSGQVAVGSTVNSI
TISDGITTITVAAADISVAADGSVTVAGQDLSSLADGTLTVTMNVTDLAGNTGDVTDTTV
LDTSAPGTGDGENQINFLDGGDELVSDAESGSVPLSGQVAVGSTVNSITISDGITTITVA
AADISVAADGTVTVAGQDLSGLADGTLTVTMNVTDLAGNTGDVTDTTVLDTSAPGTGDGE
NQINFLDGGDELVSDAESGSVPLSGQVAVGSTVNSITISDGTTTITVTAADISVAADGTV
TVAGQDLSNLADGTLTVTMNVTDLAGNTGDVTDTTVLDTSAPGTGDGENQINFLDGGDEL
VSDAESGSVPLSGQVAVGSTVNSITISDGITTITVTAADISVAADGTVTVAGQDLSNLAD
GTLTVTMNVTDLAGNTGDVTDTTVLDTSAPGTGDGENQINFLDGGDELVSDAESGSVPLS
GQVAVGSTVNSITISDGTTTITVNAVDITVAADGTVTVAGQDLSSLADGTLTVTMNVTDL
AGNTGDVTDTTVLDTSAPGTGDGENQINFLDGGDELVSDAESGSVPLSGQVAVGSTVNSI
TISDGITTITVAAADISVAADGTVTVAGQDLSGLADGTLTVTMNVTDLAGNTGDVTDTTV
LDTSAPGTGDGENQINFLDGGDELVSDAESGSVPLSGQVAVGSTVNSITISDGITTITVA
AADITVAADGSVTVAGQDLSSLADGTLTVTMNVTDLAGNTGDVTDTTVLDTSAPGTGDGE
NQINFLDGGDELVSDAESGSVPLSGQVAVGSTVNSITISDGTTTITVTAADISVAADGTV
TVAGQDLSGLADGTLTVTMNVTDLAGNTGDVTDTTVLDTSAPGTGDGENQINFLDGGDEL
VSDAESGSVPLSGQVAVGSTVNSITISDGITTITVAAADITVAADGTVTVAGQDLSSLAD
GTLTVTMNVTDLAGNTGDVTDTTVLDTSAPGTGDGENQINFLDGGDELVSDAESGSVPLS
GQVAVGSTVNSITISDGITTITVAAADISVAADGTVTVAGQDLSSLADGTLTVTMNVTDL
AGNTGDVTDTTVLDTSAPGTGDGENQINFLDGGDELVSDAESGSVPLSGQVAVGSTVNSI
TISDGTTTITVTAADISVAADGTVTVAGQDLSNLADGTLTVTMNVTDLAGNTGDVTDTTV
LDTSAPGTGDGENQINFLDGGDELVSDAESGSVPLSGQVAVGSTVNSITISDGITTITVA
AADITVAADGSVTVAGQDLSSLADGTLTVTMNVTDLAGNTGDVTDTTVLDTSAPGTGDGE
NQINFLDGGDELVSDAESGSVPLSGQVAVGSTVNSITISDGTTTITVTAADISVAADGTV
TVAGQDLSGLADGTLTVTMNVTDLAGNTGDVTDTTVLDTSAPGTGDGENQINFLDGGDEL
VSDAESGSVPLSGQVAVGSTVNSITISDSAGGSITIPAANITINLVTGAVTVMGQNLSGL
IDGTLTVTMNVTDAAGNTGSVVDTTVLDTTAPSTGDGENTISFLDGGDELLLGVESTNVD
FTTSVEADSTINTIMVTDVNGNSITIPSSNINVAPDGTVTINTQNLSGLDDGVLTVTMNV
TDLAGNTGDVTDTTTLQHTVQGENTPTWTTTTVSINGVPYIIATAWGVNGLTTISRLNND
GSLTEVDRITYNSANGTVITTSDGDITAQLTAAGLSAGDLGNGLTQSNLSYIDGVPTLFV
TSQNSAAITVWHLGSNGTVTFQGGEHIDNSQHFIRENAVYETTDGTEYVYVARPADDMIT
RLIYDSVTGELTEQPAASTPAGDLVSSVNIVSVDGIDYLLSSSLNGLSLYSINSSTGDLT
LQQSVTVPGAGSSNNAVETYTTADGSVYAIFSSQGTHQADIYRVENGSLVRTDGLSDVNF
YFSSAGYVNGTPVIAAPQESGGVTLFTLNNNGDLTEWLHIPEIENDYTPPVIVQTPDGNY
WLVDGDGNTSATLLPSVTPNSMPVSGDEDTIINGQLLEIDGSNGTSIIKFTLAGNSAEYQ
PDADGITVDVAGGSLIIYADGSYSFTPDADWSGSIPDITYTTNIGLTTKLDINVNAIADA
PNITVQEADWKLESSFEREVLPGDTPVQGIVFYTDEMEGWTPAVDGQQIEVRYAVIPASD
GNQMIELNSGSNSGIQRDITTEADQLYTLKLDVMPRGGYGIEHNTFEVFVDGVSIGLWET
SDSAGYRTVQFSFVGDGSSQNIVIKNTGTASPGGKGPFIDNVILEEHNGVIAGNAQNGSK
TDITLSDYIQGSLSDTDGSEVLTFKIGGLPDGATILVENQSVAISDNSVELTQQQLASAV
LRLDNDVYGTLELSISAIANEQSNNNTASASDTLSLVILTQDGEQIISHSINQVFSTSVT
GIGQNGSPIGHKFTLDNSAMTLTVQDNDGLLEDNNGSIPVEGSQSRDGSFQTLQNSFDGL
AAGAYIHSRAFQLVRNLTTGEEGKIYQIRIMEDYTGGMPGGTSYWAFSNDFDVNLGDEIE
IIGNFSAGGNIDYADLYHIDTNDVNEVSISPNNIINVKSAPNDSISNIDSSHESTEEVDT
FVWSKGGAGTDHIVDFDINLDKLDLSDLLQGETAKNLDQYLHFTINDTTNTTIIDIDADH
NGTFEQHIVLDGVDLSDAFGDTESDIINGLLGTNGDGPLIINTIGDVSSPSPTGSGSNPT
LEENQVTHLIP
NT seq
9756 nt
NT seq
+upstream
nt +downstream
nt
ttggcgggtaacaccggcgatgtcactgacactaccgtgctcgataccagcgcgccaggc
acaggcgatggtgagaaccaaattaacttcctcgatggcggcgatgagctggtcagtgat
gccgaatcaggtagcgtgccgctctctggccaagtggccgtgggcagcacggttaacagc
atcaccatttctgatggtaccactaccattactgtcaatgcagtcgacatcacggttgca
gctgatggcactgtgaccgttgcaggacaagacctatcgggtcttgaagatggcacttta
accgtcaccatgaacgtgaccgatttggcgggcaacaccggcgatgtcactgacaccacc
gtactggataccagcgcgccaggcacgggtgatggtgagaaccaaattaacttccttgat
ggcggcgatgagctggtcagtgatgccgaatcaaccagcgtgccgctctctggtcaagtg
gccgtgggcagcacggttaacagcatcaccatttctgacggcaccactacgatcaccgtt
actgcagccgacatcagcgtcgccgcagatggcacggtcaccgttgcaggacaagattta
tctggtcttgctgatggcaccttgactgtcaccatgaacgtgaccgatttggcgggcaac
accggcgatgtcactgacaccaccgtgctcgataccagcgcgccaggcacgggtgatggt
gagaaccaaattaacttccttgatggcggcgatgagctggtcagtgatgccgaatcaacc
agcgtgccactctccggccaagtggccgtgggcagcacggttaacagcatcaccatctct
gatggtaccactaccattactgtcaatgcagccgacatcagcgtcgccgcagatggcacg
gtcaccgttgcaggacaagatttgtcgagtctggctgatggcaccttgaccgtcaccatg
aacgtgaccgatttagcaggtaacaccggcgatgtcactgacaccaccgtgctcgatacc
agcgcgccaggcacgggtgatggtgagaaccaaattaacttccttgatggcggcgatgag
ctggtcagcgatgccgaatcaggtagcgtgccgctctcaggtcaagtggccgtgggcagc
acggttaacagcatcaccatttctgacggcatcactacgatcaccgtggctgcagccgac
atcagcgtcgccgatggctcggtcaccgttgcaggtcaagatttgtcgagtctggctgat
ggcactttaaccgtcaccatgaacgtcaccgatttagcaggtaacaccggcgatgtcact
gacactaccgtgctcgataccagcgcgccaggcacgggtgatggcgagaaccaaattaac
ttccttgatggcggcgatgagctggtcagtgatgccgaatcaggtagcgtgccgctctct
ggccaagtggccgtgggcagcacggttaacagcatcaccatttctgacggcatcactacg
atcaccgtggctgcagccgatattacggttgccgccgatggctcggtcaccgttgcaggt
caagatttgtcgaatctggctgatggcactttaaccgtcaccatgaacgtgaccgattta
gcaggtaacaccggcgatgtcactgacaccacagtgctcgataccagcgcgccaggcacg
ggtgatggtgagaaccaaattaacttccttgatggcggcgatgagctggtcagcgatgcc
gaatcaggtagcgtgccgctctcaggtcaagtggccgtgggcagcacggttaacagcatc
accatttctgacggcatcactacgatcaccgtggctgcagccgacatcagcgtcgccgcc
gatggctcggtcaccgttgcaggtcaagatttgtcgagtctggctgatggcactttaacc
gtcaccatgaacgtcaccgatttagcaggtaacaccggcgatgtcactgacactaccgtg
ctcgataccagcgcgccaggcacgggtgatggcgagaaccaaattaacttccttgatggc
ggcgatgagctggtcagtgatgccgaatcaggtagcgtgccgctctctggccaagtggcc
gtgggcagcacggttaacagcatcaccatttctgacggcatcactacgatcaccgtggct
gcagccgacatcagcgtcgcagctgatggcactgtgaccgttgcaggacaagatttatct
ggtcttgctgatggcaccttgactgtcaccatgaacgtgaccgatttggcgggtaacacc
ggcgatgtcactgacaccacagtgctcgataccagcgcgccaggcacgggcgatggtgag
aaccaaattaacttcctcgatggcggcgatgagctggtcagcgatgccgaatcaggtagc
gtgccactctctggccaagtggccgtgggcagcacggttaacagcatcaccatttctgac
ggcaccactacgatcaccgttactgcagccgacatcagcgtcgccgcagatggcacggtc
accgttgcaggtcaagatttgtcgaatctggctgatggcactttgaccgtcaccatgaac
gtcaccgatttagcaggtaacaccggcgatgtcactgacaccaccgtgctcgataccagc
gcgccaggcacgggcgatggtgagaaccaaattaacttcctcgatggcggcgatgagctg
gtcagcgatgccgaatcaggtagcgtgccactctctggccaagtggccgtgggcagcacg
gttaacagcatcaccatttctgacggcatcactactatcaccgttactgcagccgacatc
agcgtcgccgcagatggcacggtcaccgttgcaggtcaagatttgtcgaatctggctgat
ggcaccttgaccgtcaccatgaacgtcaccgatttagcaggtaacaccggcgatgtcact
gacaccacagtgctcgataccagcgcgccaggcacgggtgatggtgagaaccaaattaac
ttccttgatggcggcgatgagctggtcagcgatgccgaatcaggtagcgtgccgctctca
ggtcaagtggccgtgggcagcacagtcaacagcatcaccatctctgatggtaccactacc
attactgtcaatgcagtcgacatcacggttgcagctgatggcactgtgaccgttgcaggt
caagatttgtcgagtctggctgatggcactttaaccgtcaccatgaacgtcaccgattta
gcaggtaacaccggcgatgtcactgacaccaccgtactcgataccagcgcgccaggcacg
ggtgatggcgagaaccaaattaacttccttgatggcggcgatgagctggtcagtgatgcc
gaatcaggtagcgtgccgctctctggtcaagtggccgtgggcagcacggttaacagcatc
accatttctgacggcatcactacgatcaccgtggctgcagccgacatcagcgtcgccgca
gatggcactgtgaccgttgcaggacaagatttatctggtcttgctgatggcactttgacc
gtcaccatgaacgtcaccgatttggcgggcaacaccggcgatgtcactgacaccaccgta
ctggataccagcgcgccaggcacgggtgatggtgagaaccaaattaacttccttgatggc
ggcgatgagctggtcagtgatgccgaatcaggtagcgtgccgctctctggtcaagtggcc
gtgggcagcacggttaacagcatcaccatttctgacggcatcactacgatcaccgtggct
gcagccgatattacggttgccgccgatggctcggtcaccgttgcaggtcaagatttgtcg
agtctggctgatggcactttgaccgtcaccatgaacgtcaccgacttggcgggcaacacc
ggcgatgtcactgacaccaccgtgctcgataccagcgcgccaggcacgggtgatggtgag
aaccaaattaacttcctcgatggcggcgatgagctggtcagtgacgccgaatcaggtagc
gtgccactctctggccaagtggccgtgggcagcacggttaacagcatcactatttctgac
ggcaccactacgatcaccgttactgcagccgacatcagcgtcgccgcagatggcactgtg
accgttgcaggacaagatttatctggtcttgctgatggcaccttgaccgtcaccatgaac
gtgaccgatttggcgggcaacaccggcgatgtcactgacaccaccgtgctcgataccagc
gcgccaggcacgggtgatggtgagaaccaaattaacttccttgatggcggcgatgagctg
gtcagtgatgccgaatcaggtagcgtgccgctctctggtcaagtggccgtgggcagcacg
gttaacagcatcaccatttctgacggcatcactacgatcaccgtggctgcagccgatatt
acggttgccgccgatggcactgtgaccgttgcaggtcaagatttgtcgagtctggctgat
ggcactttaaccgtcaccatgaacgtcaccgacttggcgggcaacaccggcgatgtcact
gacaccaccgtgctcgataccagcgcgccaggcacgggtgatggtgagaaccaaattaac
ttcctcgatggcggcgatgagctggtcagcgatgccgaatcaggtagcgtgccactctct
ggccaagtggccgtgggcagcacggttaacagcatcaccatttctgacggcatcactacg
atcaccgtggctgcagccgacatcagcgtcgccgcagatggcactgtgaccgttgcaggt
caagatttgtcgagtctggctgatggcactttaaccgtcaccatgaacgtcaccgacttg
gcgggtaacaccggcgatgtcactgacactaccgtgctcgataccagcgcgccaggcaca
ggcgatggtgagaaccaaattaacttcctcgatggcggcgatgagctggtcagtgatgcc
gaatcaggtagcgtgccgctctctggccaagtggccgtgggcagcacggttaacagcatc
accatttctgacggcaccactacgatcaccgttactgcagccgacatcagcgtcgccgca
gatggcactgtgaccgttgcaggtcaagatttgtcgaatctggctgatggcactttgacc
gtcaccatgaacgtcaccgatttagcaggtaacaccggcgatgtcactgacaccaccgtg
ctcgataccagcgcgccaggcacgggcgatggtgagaaccaaattaacttcctcgatggc
ggcgatgagctggtcagcgatgccgaatcaggtagcgtgccactctctggccaagtggcc
gtgggcagcacggttaacagcatcaccatttctgacggcatcactacgatcaccgtggct
gcagccgatattacggttgccgccgatggctcggtcaccgttgcaggtcaagatttgtcg
agtctggctgatggcactttaaccgtcaccatgaacgtcaccgacttggcgggcaacacc
ggcgatgtcactgacaccacagtgctcgataccagcgcgccaggcacgggtgatggcgag
aaccaaattaacttccttgatggcggcgatgagctggtcagtgacgccgaatcaggtagc
gtgccactctctggccaagtggccgtgggcagcacggttaacagcatcactatttctgac
ggcaccactacgatcaccgttactgcagccgacatcagcgtcgccgcagatggcacggtc
accgttgcaggacaagatttatctggtcttgctgatggcaccttgaccgtcaccatgaac
gtgaccgatttggcgggcaacaccggcgatgtcactgacaccaccgtactggataccagc
gcgccaggcacgggtgatggtgagaaccaaattaacttccttgatggcggcgatgagctg
gtcagcgatgccgaatcaggtagcgtgccactctctggccaagtggccgtgggcagcacg
gttaacagcatcaccatcagtgacagcgccggtggtagtatcaccattcccgcggcaaac
atcacaatcaatttagtgacaggtgctgttacggtcatgggacagaacttatcaggctta
atcgacggcaccttaaccgtcaccatgaacgtcaccgatgcagccggtaatacgggaagt
gtcgttgataccaccgtgctcgacactactgcgccgagcactggcgatggtgagaacacc
attagctttctcgatggaggggatgagctattgttaggagtagaatccacgaacgtagac
ttcaccacttcagtagaggccgattctaccattaatactattatggttactgatgtaaat
ggcaacagcattaccattccatccagtaatataaatgtcgcccccgatgggactgtcacg
ataaatactcaaaacttatcagggttagatgatggagtactgacagttaccatgaacgtt
actgacttagcgggcaacactggcgatgtcactgacaccacaacacttcagcacacagta
cagggcgaaaatactccgacctggaccacgacgactgtcagtataaatggtgtcccgtat
atcattgcaacagcttggggcgtaaatgggctaaccactatttcacgtttgaacaacgat
ggctcactaactgaagtggatcgaattacctataatagtgcgaatggtaccgttatcacc
accagtgatggcgatattacggcccagcttactgccgctggtttgtccgcaggggatttg
ggtaacggactaacacaatccaacctaagctatattgatggtgtgccaaccctatttgtt
acctcgcaaaactctgcggcaattaccgtctggcacttgggctcaaatggtactgtcact
ttccaagggggtgaacatatagacaactctcaacactttatccgagagaatgcagtttat
gaaaccactgacggtactgaatatgtctatgtcgcccgtccggcagatgacatgatcacc
cgccttatctacgactctgtaacgggagaactgactgagcagcctgcagcgtcgactcca
gcaggcgacttagtcagctccgtgaatattgtctctgttgatggtatagattacctattg
tcatccagcttaaatggattatcactttacagcatcaactcatcaactggtgatcttacc
ttacaacaaagcgtgacggtgcctggcgcaggaagctcaaataatgcggttgaaacctat
acaacagctgatggaagtgtttatgccattttctccagtcaaggtacccatcaggctgat
atttaccgcgtagaaaatggctctctggtacgtaccgatggtctgagtgatgtgaacttc
tacttctcatcagcaggctatgtaaacggtacccctgttatcgcagcccctcaagaatca
ggtggcgtcaccctctttactttgaacaacaatggtgacctcactgagtggttacatatc
ccagaaatagaaaatgactacacgccaccagttatcgtacaaaccccggatggtaactat
tggctagtcgacggtgatggtaataccagtgcgacattgctaccttctgtaacccccaac
agtatgccggtatcaggggatgaggacacaataattaacggtcaactgcttgagattgat
ggcagtaacggtacaagtatcatcaagttcaccttggcgggcaatagcgcagagtatcaa
cctgatgctgacggtatcacagttgatgttgctggcggcagccttatcatttacgctgat
ggcagttatagctttacaccagatgccgattggagcggtagcatacccgatatcacttac
actacgaatattgggctaacaaccaaactagatatcaatgttaatgcaatagctgacgca
ccaaacatcactgttcaagaagcggattggaaactagagagcagttttgagcgtgaggta
ctacctggtgatacccccgtacaaggtatcgttttctataccgatgaaatggaaggttgg
acacccgctgtagatggacagcaaatcgaggttagatatgcagtcatcccagcctctgat
ggcaaccaaatgattgagcttaattctggaagtaactcaggtattcaaagagacatcaca
acggaagcggatcaactatacactctcaagcttgatgtcatgcccagaggtggctacggc
atcgaacacaacacgtttgaagtctttgttgacggcgtttccataggattatgggaaaca
agtgatagcgcaggataccgcaccgttcagttttcgtttgtgggtgatggcagctctcag
aatattgttattaaaaacactggtacagctagccctggcggaaaagggcctttcattgat
aatgtcattcttgaagagcacaacggtgttattgccgggaatgcgcaaaatgggagtaag
acggacatcacactgagtgattatattcaaggctccctcagcgatacggatggttctgaa
gtactcaccttcaaaattggaggtctaccagatggggcaacaattttagttgagaaccaa
tctgtggcgatttctgacaatagtgttgaactcacacaacagcagttagccagtgcggta
ctcaggctcgataatgatgtttatggcacccttgaactaagtatttcagcgatagccaac
gaacaatccaacaataatacagcaagtgcctctgataccctttcattggtgatactcact
caagatggtgagcagataatctcccattcaatcaaccaagtattcagcacctcggtgaca
ggtatcggtcaaaacggtagtcccattggtcataaattcacactcgacaacagtgccatg
accttaactgttcaagataatgatggcctgcttgaagacaacaatggctccatcccggtt
gaaggaagtcaatctcgcgatggcagcttccaaacattacaaaattcctttgatggctta
gctgcaggcgcctatatccactcccgtgccttccaacttgtgcgcaacctcaccacaggt
gaggagggaaagatttatcaaatccgcatcatggaagactacacaggtggcatgccaggt
ggtaccagttattgggctttctcaaatgattttgatgtaaatctaggagatgaaatcgag
attatcggcaacttcagtgctggaggaaacattgactatgctgatctctatcacattgat
accaatgacgtaaacgaggtttcaattagccctaataacatcatcaatgttaagtctgca
cctaatgactcaataagcaatattgacagtagccatgaatcgaccgaggaagtggatacc
tttgtctggagtaaaggaggggctggaacggatcatatagtcgactttgatataaacctc
gacaagctcgacctaagtgatctattacaaggtgagacagctaagaatctggatcagtac
cttcacttcactattaatgatacaacaaatacaaccatcatagacattgatgcagatcat
aacggcacatttgaacaacatattgttttggatggtgtagaccttagtgatgccttcggt
gacactgaaagcgacattatcaatggtttattaggtactaatggagatggcccattaatt
atcaatactataggtgatgtgtcatccccatcgccgacaggatcaggttcgaatccaaca
ttagaggaaaatcaagtcactcacttgataccttag
DBGET
integrated database retrieval system
