Shewanella sp. MTB7: HWQ47_03040
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Entry
HWQ47_03040 CDS
T10730
Symbol
fis
Name
(GenBank) DNA-binding transcriptional regulator Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
shem Shewanella sp. MTB7
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shem03000
]
HWQ47_03040 (fis)
03036 Chromosome and associated proteins [BR:
shem03036
]
HWQ47_03040 (fis)
03400 DNA repair and recombination proteins [BR:
shem03400
]
HWQ47_03040 (fis)
Transcription factors [BR:
shem03000
]
Prokaryotic type
Helix-turn-helix
Other families
HWQ47_03040 (fis)
Chromosome and associated proteins [BR:
shem03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HWQ47_03040 (fis)
DNA repair and recombination proteins [BR:
shem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HWQ47_03040 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
HTH_30
DCAF17
Phage_NinH
Xre-like-HTH
HTH_28
PUF_NOP9
Motif
Other DBs
NCBI-ProteinID:
WBJ96123
LinkDB
All DBs
Position
complement(736238..736543)
Genome browser
AA seq
101 aa
AA seq
DB search
MFDQTTNTETHQLTVGKIETANGTIKPQLLRDAVKRAVTNFFAQMDGQEAEEVYEMVLSE
VEAPLLDIIMQHTRGNQTRAANMLGINRGTLRKKLKKYGMN
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcagactactaacacagaaactcatcagcttacagttggcaaaattgaaacc
gctaacggtactatcaagcctcagttattacgtgatgcagtaaaacgcgcagtcactaac
tttttcgcccaaatggacggacaagaagctgaagaagtatatgaaatggtgttaagcgaa
gttgaagcgcctctgctagatatcatcatgcagcacactcgcggtaaccaaactcgtgca
gcaaacatgctaggtatcaaccgtggtactctgcgtaaaaaattgaagaaatacggcatg
aactaa
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