Shewanella sp. MTB7: HWQ47_04240
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Entry
HWQ47_04240 CDS
T10730
Name
(GenBank) response regulator transcription factor
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
shem Shewanella sp. MTB7
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shem03000
]
HWQ47_04240
Transcription factors [BR:
shem03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
HWQ47_04240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
HTH_40
HTH_23
Sigma70_ECF
Sigma70_r4
HTH_7
HTH_38
CDC48_2
Motif
Other DBs
NCBI-ProteinID:
WBJ96342
LinkDB
All DBs
Position
complement(1043181..1043813)
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AA seq
210 aa
AA seq
DB search
MYDGEIFTLNHTDNNLLILKNTAGLLNLKVNQHKNVATAWNKSKEKQKILLHFINSVIDD
VKYLDEILFSNGFHIAICNKLSLDDEVFLIKLGFRAAILSESPAHILLETISKILNGNLY
FSNGALSKFILNYQNQTLSKGQVLLMTSTTKKEKEVLSLVCNGYSNDQVADKLNVSINTI
KMHMQNIYKKTNIRNRSHLLLAYNQGIEIN
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatggcgaaatttttacccttaaccacacagataataatttattaatactgaag
aatactgcaggattattaaaccttaaagttaatcaacataagaatgttgcaacagcatgg
aataaatctaaagaaaagcaaaaaatattattacattttataaactcagtcatcgatgat
gtaaaatatttagacgagatacttttctctaatgggttccatattgcaatatgcaacaaa
ctatctttagatgatgaagttttccttataaaacttggatttagagcagccattctttct
gaatcaccagctcacattcttttagagacaatatcaaaaattttaaatgggaatctctac
tttagtaatggagccctatctaaattcattttaaattatcaaaaccaaacattatccaaa
ggtcaagtgttattaatgacatcgacaactaagaaagaaaaagaggtgctatctttagtt
tgcaacgggtatagcaatgatcaagtggcagacaaattaaatgtatccattaacacaata
aaaatgcacatgcaaaatatttacaaaaaaaccaatataagaaatcgcagtcacttatta
cttgcctataaccaaggcatagaaattaattaa
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