Shewanella sp. MTB7: HWQ47_06820
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Entry
HWQ47_06820 CDS
T10730
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
shem Shewanella sp. MTB7
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shem02000
]
HWQ47_06820
Transporters [BR:
shem02000
]
Other transporters
Pores ion channels [TC:
1
]
HWQ47_06820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
Porin_4
Motif
Other DBs
NCBI-ProteinID:
WBJ96825
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All DBs
Position
1630660..1631724
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AA seq
354 aa
AA seq
DB search
MQKIGVIFTLTLLTITLSVSSMLVSATEIVDEQFHFQEVVTPFFYLGAKAGWMHYQNACE
EWNISCDGDDKAYGLFGGYQFSEHFAFETAYLDLGEAVAVYSESGLNNSYVGSMKGIELS
MLARLPMSDDVDFFAKVGAFRWDGDNQGPVDHTSDSDWAPIAGVGLEYAFSRSWTARLEY
QYIDKLGSELIGGSNGHLTTLGLSYRFGQSETSVKPKQQPVTLPVVIEAEVVVLAPVVLP
AISITTLFDFDSSQLNNPQALLPVIERLQSAPNAIAQIKGYTDSKGAAAYNQALSERRVQ
SVLDYLLANGVVAEQLELQAYGEHFPEMDNKTESHRHANRRVSIVISPSTTDAE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcggcgttattttcaccttaacattattgacgatcactctatcagttagc
tccatgctagtgagtgctacggaaatagtagacgagcagtttcattttcaggaagttgtg
accccctttttttatttgggagccaaggcaggctggatgcattatcaaaatgcctgcgaa
gagtggaatattagttgcgatggtgatgataaggcttatggcctatttggcggttatcaa
ttctctgaacattttgctttcgaaaccgcttatctggatttaggcgaagctgtagctgtg
tactctgaaagcggcctgaataattcttatgtgggcagtatgaaagggatcgagttatcg
atgttagctcgattaccaatgagtgatgacgtagacttttttgccaaggtaggagcattt
cgttgggacggcgataaccaaggtcctgtggatcacactagcgactctgactgggcgcct
atagccggcgttggtttagagtatgctttttcccgctcttggacggcgcgtctcgaatat
caatatatagataagttgggcagtgagcttattggaggaagtaatggtcatctgaccacc
cttgggttgagttatcgtttcggtcaaagtgaaacgagtgtgaagcctaaacaacaacct
gtcaccctgcctgttgtgatagaggctgaggttgtggtgctagcgcctgtggtattacct
gctatttcaatcaccaccttatttgattttgacagcagccaactcaataatccacaggct
ttacttcccgttattgaacgtcttcaatctgcacccaatgctatcgcacagataaaaggt
tataccgattcaaaaggggctgctgcttataatcaggcattgtcagagcgaagagtgcaa
agtgtgctcgattatctgttagccaatggggtcgttgccgaacaacttgagttgcaggct
tatggtgaacactttcctgagatggacaacaagactgagtctcaccgacatgctaaccgt
agagtcagcattgttatctccccgtcgacgactgatgcagaataa
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