KEGG   Shewanella sp. MTB7: HWQ47_07115
Entry
HWQ47_07115       CDS       T10730                                 
Name
(GenBank) L,D-transpeptidase family protein
  KO
K19236  L,D-transpeptidase YcfS
Organism
shem  Shewanella sp. MTB7
Pathway
shem01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:shem00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01503 Cationic antimicrobial peptide (CAMP) resistance
    HWQ47_07115
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:shem01002]
    HWQ47_07115
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:shem01011]
    HWQ47_07115
Peptidases and inhibitors [BR:shem01002]
 Cysteine peptidases
  Family C82
   HWQ47_07115
Peptidoglycan biosynthesis and degradation proteins [BR:shem01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   HWQ47_07115
SSDB
Motif
Pfam: YkuD Ldt_C LysM Phage_Capsid_P3
Other DBs
NCBI-ProteinID: WBJ96879
LinkDB
Position
1708326..1709231
AA seq 301 aa
MMRVMLWFIVSLIPSIALANVYPLPEKGSRLIGEVQEHIVVKGDFFQTISKQYNIGILEL
METNPGVDPFLPTVGSKLVIPTQMLLPDVPRTGIVINLPELRLYYFPKNGKEVHVFPVGI
GRIGRETPEMVTKIKSRIPNPSWTPPASIRKDHLEERGEVLPRIVPAGPDNPLGKYAMQL
SYGDGSYLIHGTNKDFGIGMRVSSGCIRLNPDDIEWLFNQAKYGDSVRVINQTVKISSEA
NGEQIIEVHSNLSKSETDVSRDKVVSLTAGIVKFISQDSVDSFKANDALLAQDGLPVNIS
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgatgcgagtcatgttgtggttcattgtaagcttaatcccttcaattgcgttggcaaat
gtatacccattaccagaaaaaggcagtcgccttattggcgaggttcaggagcatattgtc
gttaagggagacttcttccaaaccatctcgaaacaatacaacattggtatccttgaactc
atggagaccaaccctggggtcgatccttttctgccgactgtaggctcaaaacttgttatt
cctactcagatgttgctgccagatgttcctcgtaccggaattgttattaatttgcctgag
cttcgtctttattactttccaaagaatggtaaagaggtacatgttttccctgttgggata
gggcgtattggacgtgaaacgccagaaatggtgactaagattaagtcgaggatccctaat
ccaagctggacgccacctgcgagtattcgcaaagatcacctagaagagcgtggtgaagtt
ctgccacggattgtaccagcaggacctgataaccctttaggtaagtatgcgatgcaactt
tcctatggcgatggcagttacttaattcatggaacaaataaagattttggtatcggtatg
cgtgttagctctggctgtattcgcctaaatcctgatgatatcgaatggttgttcaatcaa
gctaaatatggcgattctgtcagagtgatcaatcagacagtaaagatatcttcagaagct
aacggtgagcagattatcgaggttcattcgaacttatctaagtctgagacagatgtaagt
agagataaggtagtgagcttgacagcggggattgttaagtttatcagtcaggacagtgtt
gatagctttaaggccaatgatgccctgttagcgcaagatggtttaccggttaatattagt
ttgtag

DBGET integrated database retrieval system