Shewanella sp. MTB7: HWQ47_07705
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Entry
HWQ47_07705 CDS
T10730
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
shem Shewanella sp. MTB7
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shem02000
]
HWQ47_07705
Transporters [BR:
shem02000
]
Other transporters
Pores ion channels [TC:
1
]
HWQ47_07705
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
TSP_3
Porin_4
OprF
DUF5406
Motif
Other DBs
NCBI-ProteinID:
WBJ96985
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Position
complement(1841123..1842241)
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AA seq
372 aa
AA seq
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MMNNTLKAVLLTSMLPFAANAAQELTPWYVGGGIGVNNYEPNCDMKTMKVCGKDDPYAWD
VFGGYLFNDYFGVELGYRDLGRAEWTDYANKLNDVGAKGMTLGLVGFLPLSQRWGLSAEA
GAMNYLLSNNKQWGTEYYSDSGVAPYFGVGVDYNITESLKMQLKYRRYENLEDDKWNTLD
MESNYWGLALSYRFGTATPAAVAAAPLVVAPLDSDNDGVIDNLDKCGNTPSTHQIDNYGC
SLSLYIETTEQHEVGSILFANNSSVVKAESYEKIEKLATYMNNNPKSTVLILGHSSDVGQ
AAYNMMLSDKRANAVANILVEKYGINQDRVSAKGQGITQPIIEGNSPEANKANRRIEAYI
TDLKSESVLMLK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaatacattaaaagcagttctgctaacttctatgcttccatttgcagccaat
gcggcacaagaactaacgccgtggtacgttggtggtggtataggtgttaataattatgaa
ccaaactgtgacatgaaaaccatgaaagtatgtggtaaagatgatccttatgcttgggac
gtatttggtggttacctatttaatgactattttggtgttgagttaggttaccgcgatctt
ggtcgcgctgagtggacagattacgccaataagttaaacgatgtaggcgctaaaggtatg
accttaggtctggttggttttttacccttatcacaacgttggggcctttcggctgaagcg
ggcgcgatgaactacctactgtcaaacaacaaacagtggggcactgaatattacagtgat
agtggcgtagccccctacttcggtgttggagttgactataacatcactgaaagcttaaaa
atgcagcttaaatatcgccgctatgagaatttagaggatgacaagtggaacaccctcgac
atggaaagcaactattggggcttagcgcttagctaccgatttggtactgcaactccagca
gctgttgctgccgctcctttggttgtcgcccctctcgattcagacaatgatggtgttatt
gacaaccttgataaatgtggcaataccccgtcaacccaccaaatcgataactatggatgt
agtctcagcctttatatcgaaacgactgagcaacatgaagttggatcaattttattcgct
aacaactcttctgtagttaaagctgaatcatatgaaaaaattgaaaaactagcgacttac
atgaataacaatccaaaatcaaccgtactgattttagggcactcatcagatgtagggcaa
gctgcctacaatatgatgttatccgacaagcgtgctaacgctgttgcgaacattttggtg
gaaaaatatgggatcaaccaagatagagtgtcagcaaaaggacaagggataacgcagcca
attattgaaggtaatagccccgaagcaaacaaagctaaccgtcgtatagaagcctacata
acagacttaaagagtgaatctgttcttatgcttaagtaa
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