Shewanella sp. MTB7: HWQ47_08685
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Entry
HWQ47_08685 CDS
T10730
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
shem Shewanella sp. MTB7
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shem02000
]
HWQ47_08685
Transporters [BR:
shem02000
]
Other transporters
Pores ion channels [TC:
1
]
HWQ47_08685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
Porin_OmpG
OprF
Motif
Other DBs
NCBI-ProteinID:
WBJ97159
LinkDB
All DBs
Position
2056363..2057346
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AA seq
327 aa
AA seq
DB search
MLKNLIMWLLIFPITVSTTIARAAPTQPVFGYAGMDIGHGSHVNANDIVKHHLVGGVHVG
YQFNDYLSTELAYQYLDDVEIDTLNGVSTAHSQQLALSAILGYPTVHDSYPYLKLGVATW
HINAKGQQNASGVAPLFGLGYRYPLSQHLSMRTEYQTTVNIGNHSLGYTDNHVFMLSLSW
KVGRKVSVHNIAHITDNIRLQDTNEITPSNAVSADNNTSTSFKVMFATNSSMLMHHSGLN
KALHYLKFHPNTKINIIGYSDDTGEESYNLWLSTRRAQAVADYFINQDVINKINITIISK
GEVPLTDTDDIELLRSLNRRAEIIVIN
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaatttaattatgtggttattaatttttcctattacggtatcgacaacaata
gcccgtgcagccccaactcaacccgtttttgggtatgcgggcatggatattggtcatggt
agtcatgtcaacgctaatgatatcgttaagcatcaccttgttggtggtgtgcatgttggc
tatcaattcaatgattacctatcaacagagcttgcatatcaatatttagatgatgttgaa
attgatacgcttaatggcgtcagcactgcccactctcaacaactcgcattgagcgcaata
ttggggtacccaacagttcatgatagctatccctatctcaagttaggtgtagcaacatgg
cacatcaatgccaaaggccaacaaaatgcttccggcgtggcgccactttttgggcttggg
tatcgctaccccctgagccaacatctgtccatgcgcactgaatatcagacaaccgttaat
atcggcaatcatagcctcggttataccgataaccatgtgtttatgcttagtcttagttgg
aaagttggtcgtaaagtgagcgtgcataatattgcccacattacagacaacatacgccta
caagacactaatgaaataactccatcgaacgctgtttcagcggataacaatacttcaact
tcatttaaagtaatgtttgcaactaactccagtatgttaatgcatcactcaggattaaat
aaggcccttcactatcttaagtttcatcccaacacaaagattaacatcataggctacagt
gatgatactggcgaggagagctataacttatggctatcgacacgtcgagcgcaagcagta
gctgactacttcattaatcaagatgtaattaataaaattaacataaccattatttcaaaa
ggagaagtaccgttaaccgatactgatgatattgaattattaagatccttaaatagacgt
gcggaaattatcgttattaattaa
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