Shewanella sp. MTB7: HWQ47_09360
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Entry
HWQ47_09360 CDS
T10730
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
shem Shewanella sp. MTB7
Pathway
shem02020
Two-component system
shem02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HWQ47_09360
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HWQ47_09360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shem03021
]
HWQ47_09360
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
shem02035
]
HWQ47_09360
Transcription machinery [BR:
shem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HWQ47_09360
Bacterial motility proteins [BR:
shem02035
]
Flagellar system
Flagellar assembly proteins
Stator
HWQ47_09360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_10
HTH_23
UPF0122
MenC_N
GerE
T4-Gluco-transf
Motif
Other DBs
NCBI-ProteinID:
WBJ97277
LinkDB
All DBs
Position
2205241..2205981
Genome browser
AA seq
246 aa
AA seq
DB search
MSKTAAYTCLDNKASIVEQYAPLVKKIAHHLLARLPASVQIDDLLQAGMMGLLEASTNFD
GSKGAKFETFAGIRIRGSMLDEIRRGDWVPRSVHRNQRRVAQVIDELEQELGRDAKDSEI
AQKLDISLNEYHHILNDVSVGKVIGIEDLGVSVDVISHAEGQQDDTFESIVDVEFHTALV
AAIKLLPERDGLVLSLYYDEALNLKEIGAILEVSESRVSQILSQAMLRLKAKLKHWTHNN
DHVRNN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaaccgctgcgtatacttgtttggataataaagcttctatcgttgaacagtat
gctccattggtaaaaaaaattgctcaccatctcttagcccgcttaccagcatcggttcaa
atcgatgatctgttgcaggccggtatgatggggcttctcgaagcttctacaaattttgat
ggtagtaagggggcgaagtttgaaacctttgccggaattaggatccgcggttcaatgctt
gatgaaattcgccgcggagactgggttccaaggtcggtgcatcgaaatcaaaggcgtgtt
gctcaggtcattgatgagttagagcaagagctaggtcgagatgctaaagactctgaaatt
gctcaaaaacttgatatatcgctaaatgagtaccaccatattcttaatgatgtttcagtt
gggaaagtgatcggcattgaagatcttggtgtgtcggttgatgttattagtcatgctgaa
ggtcagcaagatgatacatttgaatcaattgtagatgttgagtttcatacggccttggtg
gcagctattaaactattgcctgaaagagatgggttagttttgtcgctttattatgatgaa
gcattaaatttaaaagagattggggccattcttgaggttagtgagtcacgggtaagtcag
atattaagtcaggcaatgctcagactaaaagctaaacttaagcactggacacataataac
gatcacgtacgtaataattag
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