Shewanella sp. MTB7: HWQ47_09985
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Entry
HWQ47_09985 CDS
T10730
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
shem Shewanella sp. MTB7
Pathway
shem03060
Protein export
shem03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HWQ47_09985 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HWQ47_09985 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
shem02044
]
HWQ47_09985 (secD)
Secretion system [BR:
shem02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HWQ47_09985 (secD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD-TM1
SecDF_P1_head
SecD_1st
SecD_SecF_C
MMPL
Sec_GG
DUF348
Motif
Other DBs
NCBI-ProteinID:
WBJ97375
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Position
2333860..2335710
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AA seq
616 aa
AA seq
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MLNKYPMWKNLMVIIIISVGFFYAIPNLFGEDYAVQVVATRGAEVTATTQSTVNDILASK
NITVKRSELENGQLLVRVSNGEQQLLAKEAIVESLGDKYIVALNLAPATPDWLESMGGSP
MKLGLDLRGGVHFLMEVDMGEAVRKMTEAKMSDFRTDLRGEKIRYAGIRNTPKGIEIKFR
DAENLGKAERFLKTRGNDMVFNDISSGDNYALRATLSEAYVKQVKEEALQQNITTIRNRV
NELGVAEPVVQRQGAERIIVELPGVQDTARAKDILGATASIEFHMVDEKADAAAAASGRI
SPSSQVYNRRNGGQVVLQKAVMLTGDHIQGAQPSFDEYSRPQVSINLDSKGGSIFSNVTK
DNIGKPMATLFIEYKDNGDRNPDGSIKMQKIEEVISVATIQARLGRNFVITGLEHAEAQN
LALLLRAGALIAPVTIVEERTIGPSLGKENIQNGVQAMIWGMAVVLIFMLIYYRAFGLIA
NLALTANLVMVVGVMSMIPGAVLTLPGIAGMVLTVGMAVDGNVLIYERIREELRNGRSVQ
QAIHEGYGNAFSTIADANITTFMTALILFAVGTGAVKGFAVTLMIGIATSMFTSIVGTRS
IVNAIWGGKRVKKLSI
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaataaatatccaatgtggaagaacctaatggtgataattatcatctctgtgggt
tttttctatgcgatcccgaatctctttggggaagactatgccgtacaggttgtggctacc
cgaggtgctgaggttacggcgacgactcagtcgactgtaaacgatattcttgcgagtaag
aatatcacggtaaaacgctctgagcttgaaaatggtcagttattagttcgagtgagtaat
ggcgaacaacaactgttagcgaaagaagcgattgtcgaatcgctaggtgataaatacatc
gtcgccttgaacttggctccagctacaccagattggcttgagtcaatgggtggcagcccg
atgaagttaggtctggatctacgtggtggtgtgcatttccttatggaagtggacatgggc
gaagcagttcgaaagatgacagaagctaaaatgtcagactttagaaccgatctacgtggc
gaaaaaattcgttatgcagggattcgaaatacacctaaagggattgaaattaagttccgt
gatgcagagaacttaggtaaagccgaacgttttctaaagacccgtggtaatgacatggtg
tttaatgatatttcatcaggcgacaactatgcacttcgggctacgctaagcgaagcttat
gttaaacaggtaaaagaggaagccctacagcaaaacatcaccacgatccgtaatcgtgtg
aatgagctgggtgtcgcagagcctgtggtacaacgtcaaggtgctgaacgtataattgtt
gagctgccaggtgttcaagacacagctcgcgctaaagatattctaggcgcaacggcatca
attgaattccacatggttgatgagaaagccgacgcagccgccgctgcgagtggtcgaatt
tctccaagttctcaagtttataatcgccgaaatggtggtcaagtcgtgctgcaaaaagcg
gttatgttgaccggtgatcatattcaaggtgcacaaccaagttttgatgagtacagtcgt
cctcaggtgagcattaacttggactctaaaggcgggtcaatcttttcaaatgtgactaag
gacaacattggtaaaccaatggcgaccctattcattgagtataaagataatggtgataga
aatcctgatggcagcatcaagatgcagaagattgaagaagttatctctgttgcaaccatc
caagcacgtcttggtcgtaacttcgttatcacaggtcttgaacacgctgaagcacaaaat
ttagcgctactacttcgtgctggcgccttgattgccccggtgacgattgtagaggagcgt
acgattggtccaagcctaggtaaagaaaatatccagaacggtgttcaagcgatgatctgg
ggtatggctgttgtacttatctttatgctgatctactaccgtgcttttggtcttatcgct
aacttagcgctaacggctaacctagtgatggttgttggtgttatgtcgatgatcccaggc
gctgtgcttacgctgccgggtattgccggtatggtgttgacagtcggtatggctgttgat
ggtaacgtgcttatctacgagcgtattcgtgaagagttacgtaacggtcgtagtgttcag
caagctattcatgaaggttatggcaatgcattctcaaccattgctgatgccaacatcacc
acctttatgaccgcgcttatcctgtttgctgttggtactggtgcggttaaaggcttcgct
gtgacgctgatgatcggtattgcaacgtctatgtttacctctatcgtgggaactcgctca
atagttaatgctatttggggtggtaaacgcgttaagaaactttctatataa
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