Shewanella sp. MTB7: HWQ47_11165
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Entry
HWQ47_11165 CDS
T10730
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
shem Shewanella sp. MTB7
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shem03009
]
HWQ47_11165 (rluC)
Enzymes [BR:
shem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
HWQ47_11165 (rluC)
Ribosome biogenesis [BR:
shem03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HWQ47_11165 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Phage_Gene33
TGS
RluD_N
Ig_BT4661_2nd
FHA
Motif
Other DBs
NCBI-ProteinID:
WBJ97599
LinkDB
All DBs
Position
2634412..2635371
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AA seq
319 aa
AA seq
DB search
MNTELPKVKVQLVTIDEDHVGQRIDNYLLAKLKGVPKSMIYRIVRKGEVRVNKKRIKPEY
KLQDGDIVRIPPVRVSDNAERPGPSANLSKVSQLEERILFEDKHLIVLNKPAGLAVHGGS
GIDFGIIEAMRSLRPTQKFLELAHRLDKDTSGVLLIAKKRSALRHLHDQLRFKKMQKDYQ
ALVKGTWQAKDKAIKAPLLKLTLKSGERIVRVNQEGKECETRFKILQRYQGSTLVQASPV
TGRTHQIRVHCQYTGHPIACDDKYSEQKYDDSLRALGLNRLFLHAAQLRFIHPGTEEVMI
VKAPLDPILIQTLDRLVKV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgaacttccaaaagtaaaagtccagcttgttacaatcgatgaagatcatgtt
ggtcaacgtatagacaattatttactggctaaactgaaaggtgtgccaaaaagcatgatt
tatcggatcgtgcgtaaaggtgaagtcagggttaataaaaagcgaattaaacctgaatat
aaactgcaagacggcgatattgtcagaattccgccagtgcgggtatcggacaatgcagag
cgtccggggccgtcagccaacttaagtaaagtgtcgcagttagaagaacgtattctgttt
gaagataaacatctcatcgtgttaaataaacccgctgggcttgcggttcatggtggtagt
ggtatcgattttggtattatcgaagccatgcgttcgttacgtccgactcagaaattcttg
gagttagctcatcgtctggataaagatacgtcaggcgttttacttattgccaagaagcgt
agtgctctgagacacctgcatgatcaacttagatttaagaaaatgcagaaagattatcaa
gcgttggtaaaagggacttggcaagctaaagataaggcgattaaagcgccattattgaag
ctcaccttaaagtctggtgagcgtattgtgcgagtcaatcaagaaggtaaagagtgtgag
actcgttttaagattttacagcgttaccagggaagtactcttgtgcaagccagtcctgta
accggccgaactcatcaaattcgagtacattgtcaatatacgggacatcctattgcgtgt
gacgataagtacagtgagcaaaagtatgatgacagtttaagagcgctcgggctaaatcga
ctcttccttcatgctgcacaattaaggtttattcatccagggactgaagaggtgatgatt
gttaaagcgcctttagatcctattttgatccagaccttagatagactggtaaaagtatga
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