Shewanella sp. MTB7: HWQ47_12405
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Entry
HWQ47_12405 CDS
T10730
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
shem Shewanella sp. MTB7
Pathway
shem00541
Biosynthesis of various nucleotide sugars
shem01100
Metabolic pathways
shem01250
Biosynthesis of nucleotide sugars
Module
shem_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HWQ47_12405 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shem01005
]
HWQ47_12405 (kdsB)
Enzymes [BR:
shem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HWQ47_12405 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
shem01005
]
Lipid A
HWQ47_12405 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
WBJ97832
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Position
complement(2905012..2905749)
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AA seq
245 aa
AA seq
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MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLSAIYVATDDIRIKDAVE
SFGGKVVMTDPEAASGTDRIDDAIQQLELNDDDIVINVQGDQPLIDPIAIEQLISLFERH
PGEFSMATLAVEITKESELDNPNHVKVVFDNNYNALYFSRARIPFGRDNNDHPVYKHLGI
YAYTRSFISTFAKLPLGRLEELEKLEQLRALEHGHKIKIAISAFDFPEVDTPEDIRICEA
RLAVD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaactctgttaatccctgctcgctatggctcaagccgttttccaggcaagcct
ttggcgccgattaacggtaagccaatgatccaacacgtctatgaacgtgcatctttggca
aaaggcctaagcgctatctatgtcgcaaccgatgatatacgtatcaaagatgctgttgaa
tccttcggcggaaaagtggtaatgacagatccagaggctgcatccggaaccgatcgcatc
gatgatgcaattcaacagctagaacttaacgatgacgatatcgtcattaatgtgcagggc
gatcaacctttgattgacccgatcgcgattgaacaacttatcagcctttttgagcgccat
cctggtgagtttagtatggcgacactcgctgtcgaaattactaaagagtcagaacttgat
aatccaaaccatgtaaaagttgtgtttgataataactataatgctctgtatttttcgcgt
gccagaattccttttggccgtgacaataatgatcatccagtttataagcatttagggatc
tacgcttatacacgtagttttatctctacttttgcaaaattgccactaggtcgtttagaa
gagctagaaaaactagagcaacttagggcgctggaacacggtcacaagatcaaaatagcc
atcagtgcttttgattttcctgaagtcgataccccagaagacattcgtatttgtgaagct
cgtttagccgtcgactaa
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