Shewanella sp. MTB7: HWQ47_13970
Help
Entry
HWQ47_13970 CDS
T10730
Symbol
prpF
Name
(GenBank) 2-methylaconitate cis-trans isomerase PrpF
KO
K09788
2-methylaconitate isomerase [EC:5.3.3.-]
Organism
shem Shewanella sp. MTB7
Pathway
shem00640
Propanoate metabolism
shem01100
Metabolic pathways
shem01120
Microbial metabolism in diverse environments
shem01200
Carbon metabolism
Module
shem_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HWQ47_13970 (prpF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PrpF
Motif
Other DBs
NCBI-ProteinID:
WBJ93078
LinkDB
All DBs
Position
complement(3252302..3253534)
Genome browser
AA seq
410 aa
AA seq
DB search
MGQEPKALPVFSLQIKIPATYMRGGTSKGVFFNLEDLPAQAQIAGDERDELLLRVIGSPD
PYGKQTDGMGGATSSTSKTVIIAKSAQADHDVDYLFGQVAIDKPFVDWSGNCGNLSAAVG
SFAISSGLVNPERIPDNGIAVVRIWQANINKTIIAHVPVTNGEVQETGGFELDGVTFPAA
EVLVEFMDPADGEGAMFPTGNLVDDLIVPTEVVAAGVLKATMINAGIPTIFINASDLGYT
GAELQQAINGDPKALAMFEVIRAHGAVKMGLISHIDEAAGRQHTPKVAIVAEPMDYTSSS
GKVILSTDIDLNVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGVDRESAASGN
VVFGHPSGTLKVGAEAKFENGQWQVTKAAMSRSARVLMEGWVRVPGDTFK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgggacaagaacctaaagctctgccagttttttctcttcagataaaaatacctgcgacg
tatatgcgtggtggtaccagtaaaggagtgtttttcaatctcgaggacctaccggcacaa
gcacaaatcgcgggtgatgaacgcgatgaattgttgcttagggtgattggcagtcctgat
ccctatggaaagcaaacagatggcatgggaggcgcgacctcaagtaccagtaaaacagta
attatcgctaaaagtgctcaagcagatcacgatgttgattatctgtttggccaagtggca
atcgataaaccttttgttgattggagtggcaattgcggtaatttatctgccgcggttggt
tcgtttgcaatcagtagtggcttagttaatcctgagcgcatacctgataatggcatcgcg
gtcgtacgaatttggcaagctaatattaacaaaaccattatcgcgcacgtgcctgtgact
aacggtgaagtgcaggagacggggggttttgaactcgacggtgtgacttttcctgctgct
gaagtcttggttgaatttatggacccggctgatggagagggggcgatgttccccactggg
aacttagtcgatgacttaattgtgcctactgaagttgttgcagctggagtattaaaagcc
acgatgatcaacgcagggatcccgacgatctttattaatgctagcgatctaggctataca
ggagctgagcttcagcaagctataaacggcgatccaaaggcattggcgatgtttgaggtt
attcgtgctcatggtgcggttaagatgggactcattagtcatatcgatgaagctgctggg
agacaacatacccccaaagtggctattgttgctgaacctatggattacacctcatcaagt
ggaaaggttattttaagcacggatatagatttgaatgtgcgcgcactctcaatgggtaaa
cttcatcatgccatgatgggcaccgctgcggtagctattgggactgcagcagccatacct
ggcactttagttaatcttgctgctggtggtgtggacagagaatctgcagcaagtggtaat
gtcgtatttggtcatccttcggggacattgaaggtgggtgctgaagcaaagtttgaaaat
gggcaatggcaggtaactaaagccgcaatgagccgaagtgcacgagtattgatggaaggc
tgggtgagagtgcctggagatacgttcaaataa
DBGET
integrated database retrieval system
