Shewanella sp. MTB7: HWQ47_14385
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Entry
HWQ47_14385 CDS
T10730
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
shem Shewanella sp. MTB7
Pathway
shem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HWQ47_14385 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shem03400
]
HWQ47_14385 (ruvB)
Enzymes [BR:
shem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HWQ47_14385 (ruvB)
DNA repair and recombination proteins [BR:
shem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HWQ47_14385 (ruvB)
RecFOR pathway proteins
HWQ47_14385 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
AAA_14
Mg_chelatase
AAA_3
AAA_22
nSTAND3
AAA_24
Bac_DnaA
DUF815
NB-ARC
AAA_17
AAA_18
RNA_helicase
Rad17
AAA_25
TsaE
NTPase_1
IstB_IS21
NPHP3_N
AAA_11
NACHT
AAA_33
ABC_tran
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
WBJ93146
LinkDB
All DBs
Position
complement(3342807..3343823)
Genome browser
AA seq
338 aa
AA seq
DB search
MIEADRLIHAAPQGFEERDEQIDRAMRPKTLDEYTGQDDTRAQLKIFIQAAQNRGEALDH
MLIYGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEPGDVLFIDEIHR
LSSVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRARFGI
PLRLEFYNIKDLCSIVTRSANVLELPIDEEGAIELAKRSRGTPRIANRLLRRVRDYAEVK
HDGVINKKVADLALDMLDVDAEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETI
EDVLEPFLIQQGFIQRTPRGRIATQRAYQHFDIIQPDK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagcagatcgtttaattcatgctgcaccacagggatttgaagagcgtgatgag
caaattgacagggctatgcgccctaaaacgctcgatgagtacacgggacaagatgatact
cgtgcacagttaaaaatatttattcaagcagctcaaaatcgtggtgaagcactggatcat
atgctgatctatggccctccaggtttaggtaagacaactttggctatgattgtagccaat
gaaatgggagtgaatataaagtccacttcagggcctgtgcttgaaaaagctggggactta
gcggctctgttaacgaacctagaacctggtgatgtgctatttattgacgaaattcatcgt
ttaagttcagtggttgaagagatcttgtacccagcgatggaagactaccaactagatata
atgattggtgaaggtcctgctgcacgttcaataaagttggatttacctccgtttacgctc
ataggcgccacgacacgtgcgggatcgttgacctcacctttaagagcccggtttgggatc
cctttaaggttagagttctataatattaaagacctatgctctattgtaacccgctcagct
aatgttctagaactgcctattgatgaagagggggctatcgaattggctaagcgctctagg
ggcacgccaagaattgctaatcggttactgcgtcgtgtgcgtgattatgcagaagtgaaa
catgatggtgttatcaataaaaaggtcgctgatctcgcacttgatatgctcgatgtcgat
gccgaaggttttgactatatggacagaaagttactgctggcgattattgataaatttatg
gggggcccggtagggctagataatctcgcggctgctattggtgaggaacgtgaaaccatc
gaagatgtactggaaccttttttgatccagcaaggttttattcaacgtacgccaagaggt
cgaattgcgacgcaacgtgcgtatcaacattttgacattatccaacctgacaaatag
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