Shewanella sp. MTB7: HWQ47_14755
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Entry
HWQ47_14755 CDS
T10730
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
shem Shewanella sp. MTB7
Pathway
shem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HWQ47_14755 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shem03400
]
HWQ47_14755 (recC)
Enzymes [BR:
shem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HWQ47_14755 (recC)
DNA repair and recombination proteins [BR:
shem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HWQ47_14755 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
UvrD_C
tify
Motif
Other DBs
NCBI-ProteinID:
WBJ93216
LinkDB
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Position
3424289..3427942
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AA seq
1217 aa
AA seq
DB search
MLYLVQSNRMEALSAQLAEELKTPIPGMPLLMPEQILVQSPGMSTWLRLEIASKNKIAAA
LEFPLPSSFIWQLCHILLPDVPKENAFTKPSMTWKLMELLPELLNIDAFAPLNNYLNAAN
RTGEIKEEPLKLFQLCGQIADIFDQYLVYRPDWIAAWEANEPTLPPRGDKLDPSQTWQPI
LWRALIEFNNERLNKSRYHRANLHQSLFDALDDPNTDLDGLPRRLFVFGISSMAPQTLDV
LYHLAKRIDVIMLNLSPCQHYWGDIVDPRLRARMALEYANKHKLETLWEDKLEVGNPLLA
NNGKMGRELLDLILELPEEHTNFNFECYQDPGIESLLQGIQHDILELETRDRSLGPDASL
YLTLEGRRTLASNDDSLTLRSCHSPLREIETLHDHLLEMLSREPINPDDPLLAKDIVIML
PDVAAYAPYIDAVFSAKQGAHYIPYAIADRGAAQESPLINSFLHILSINQSRFGLTDILG
ILEVPAVLRRFELDDEALMMIRHWLEQAGVRWGRDETSRAAQSLPAFDKNSWAFGIKRLI
LGYAFSDDAALYQDTLTVAGIEGQSAQALGKLLNFIEALDEYRLQLAQNCDIEVRMAQLT
QLLEDFYEVDDEERMQLQAIREAISKLKTELNEAGQVTPLNTQVLQNWFNSTLSESRVGQ
RYLAGSVNFCTLMPMRSIPFKVVCLVGMNDGIYPRVQHPVGFDLVAQFGPRKGDRSRRLD
DRYLFLEAILSAREQLYISYIGHSERDNSERIPSMLVSELVEYCQLCYLPEAFNKLDRSD
DETIVKVIPAIEKAVHQQLLIEQPLQPFDERLYLSQDPESSIQESSASTSLKQSALKQSG
LKQSYSAQWCPATPPADAKELDLTNRLLKKSDTPRFIETGVNITQVNEQRDSLDTEELEV
SALIRFFRNPAQYFFNRSLKVDLGLNIQADDNDEPFSLNALERYKLQANLLDNAISQNLE
TPDAVLLQRLKASGELPLQPFDDLLLGQYLNDIKPIIGRTLYLRGENQHSQDIELAFTQA
DGLNDAITLVGRIDDLCAKGLVNYRPGTANGRDLIRVYLRHLCICAMKDAVLADAANSTT
GQVCGKQHISYLLDIGHFHAFHGVTSEQAKALLSLWLCHFQSGQLHPLMFMPRTALAYVE
AEGEHGEKLIEAQSQWKDEQNQLGEGFEPHYQRLFSFPDDFTEDRFGQIAMTLLSPMLSL
YHKDKLSELSAFVEGGA
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgctctatctagttcaatctaatcgaatggaagccctctcagcacaacttgccgaggag
ttaaaaacgccaatccctggaatgccactattaatgcctgaacagatattggttcaaagc
ccaggaatgtccacttggttaagactagagatagccagcaagaacaagatcgccgccgca
ttagaatttccgctgccgtctagctttatctggcaactttgccacatactcttgcccgat
gtgcctaaagagaacgcgttcactaaaccatcgatgacctggaaactgatggagttgctg
cctgagctgctcaatatcgacgcatttgctccgttgaataactacctcaacgcagctaac
cgtactggagagataaaagaagaaccgctgaaactatttcagctttgcggccaaatcgca
gatatcttcgatcaatacttggtttataggccagattggatagcggcttgggaagccaat
gaacctactttgcctcccagaggggacaaactggatccttcacagacttggcaacctatt
ttgtggcgcgcgctcatcgaatttaataatgaacgtcttaacaagagtcgttatcacagg
gcaaacttgcatcaatctctgtttgatgcactcgatgatcccaatactgatctcgacggg
ctaccaaggcgtttattcgtgtttggcatctcatccatggcgccacaaaccttagatgtg
ctttatcatctggccaaacgtattgatgtgatcatgttaaatttaagtccttgtcagcac
tattggggcgacattgtcgatccccgcctacgtgcacgtatggcacttgaatacgctaac
aagcataagcttgaaaccctatgggaagataaactcgaagtgggcaatcccctacttgcc
aataatggcaaaatgggacgtgaactactggatcttattttggagcttcctgaggagcac
accaactttaattttgagtgttaccaagaccccggcatagagagcctacttcaaggcata
caacatgatattctcgaactcgaaacccgtgatagaagcttagggccagatgcatcactc
taccttacactcgagggtcgccgtactctggcaagcaatgatgactcgctaacattgaga
agttgccacagcccactgcgtgagattgaaactctgcacgatcatctattggagatgctc
tcccgtgagcctatcaatccagatgatccactgctggccaaagacatcgttatcatgctt
cccgatgtggccgcatatgcaccctatattgatgcggtcttttcagcaaaacagggcgcg
cactatattccctacgccattgccgacagaggcgcggcgcaggaatcaccgctaatcaac
agctttctgcatattctgtccatcaatcaaagtcgttttgggctaacggatatcttaggc
attttagaagtgcctgctgtactaagacgcttcgagcttgatgatgaagccctaatgatg
atccgccactggctcgaacaagcaggcgtgcgttggggacgtgatgaaaccagtcgcgcg
gcgcaatcactgccagcattcgataaaaactcttgggcctttggcattaaacgcctcatc
ttaggttatgcctttagcgatgacgcagcgctgtatcaagacaccttaaccgtggccggc
atcgaaggacaatcggctcaagcattaggaaaactactgaactttatcgaagccttagat
gagtatcgcctgcaacttgcgcagaactgtgacattgaagtgcgtatggcgcagctgact
caattactagaagatttctatgaagttgatgacgaagagcgtatgcagctacaagccatt
cgtgaggcgataagcaaactcaaaactgagcttaatgaggcaggacaagtcactccgctt
aacacgcaagtgctgcaaaactggtttaatagtacattaagtgaatctcgcgttggtcaa
agatacttagccggtagcgttaacttttgtaccttgatgccgatgcgctctatccccttt
aaggtggtttgtttagttggcatgaatgatggcatctacccgagagtacaacatccagtg
ggatttgatctggtggcacaatttggcccacgaaaaggcgaccgctcgcgccgtttagat
gacagatacctgtttttagaggcgatactttccgcccgcgagcaactttacatcagctat
atcggtcacagtgagcgtgataactcggagcggatcccctcaatgttagtctctgagttg
gttgaatattgccagctctgttatctacctgaagcattcaacaagcttgatagaagtgac
gatgagacgatagtcaaggtgatccccgctattgagaaagctgtccaccaacagttattg
attgagcagccactgcaacctttcgatgaacgcctttacttaagtcaagatccagaatca
tctatacaagagtcgtcagcctctacttcattaaaacaatcggcgctcaaacagagcggt
cttaaacaaagttattcggcccagtggtgtccagcaacacctcctgcagatgcaaaagag
ttggatctaacaaacaggttacttaaaaagagtgacacgccacgttttattgaaactggg
gtgaacatcactcaagtcaacgagcaacgagatagtctagatactgaagagttggaggtt
tccgcgctcattcgcttcttcagaaatccagcgcagtactttttcaatcgcagtctaaaa
gttgatttaggactcaatatccaagcagatgataacgatgagccctttagcttaaatgca
ctagagcgctataagttgcaagccaatctactggataatgctatctcacaaaatcttgaa
acacctgatgcggtattactgcaacggctaaaagccagcggtgaactgccactgcaaccc
tttgatgatctgttacttggccaatatctcaatgacataaaacccatcattggtcgcacg
ctttatctgcggggtgaaaatcagcactcacaggatatcgagcttgcctttactcaagca
gatggcctaaatgatgccatcacattagtgggacgcatagatgacctctgtgctaagggc
ttagtcaattaccgccccggcaccgccaatggccgtgacttaattcgcgtttacttaagg
catttgtgtatttgtgccatgaaagatgctgtgctagctgatgctgctaacagtactact
ggtcaagtctgcggcaaacagcatatcagttacctgcttgatatcggtcatttccacgca
tttcatggggtgacatcagagcaagctaaggcgctattgagtctttggttatgtcacttt
caatcaggacagctgcaccctttaatgtttatgcccagaaccgccctcgcctatgtcgaa
gcagaaggggaacatggtgagaaacttatcgaagcacaaagtcagtggaaagatgaacaa
aatcagctgggtgaaggctttgagcctcattatcaacgtcttttcagtttccctgatgat
ttcacagaagacagattcggacagattgccatgacactgctcagccctatgctcagcctg
tatcacaaagacaaacttagcgagttgtctgcatttgttgaagggggcgcttaa
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