Shewanella sp. MTB7: HWQ47_14765
Help
Entry
HWQ47_14765 CDS
T10730
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
shem Shewanella sp. MTB7
Pathway
shem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HWQ47_14765 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shem03400
]
HWQ47_14765 (recD)
Enzymes [BR:
shem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HWQ47_14765 (recD)
DNA repair and recombination proteins [BR:
shem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HWQ47_14765 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
RecD_N
AAA_11
Helicase_RecD
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
PhoH
UvrD_C
nSTAND3
CbiA
AAA_16
AAA_28
NTPase_1
AAA_14
AAA_5
Flavi_DEAD
NACHT
AAA_7
T2SSE
FtsK_SpoIIIE
SRP54
AAA_24
ResIII
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WBJ93218
LinkDB
All DBs
Position
3431644..3433773
Genome browser
AA seq
709 aa
AA seq
DB search
MIQSTQPIKVLLKVWEAERLITPLDRHFAIELAQLHQTQLKTLDEAHTSETSYKKGAYRE
LFLLICALLSKQLSQQHTCLPIHQISLDNPMVEQVSHCRITCTHSELTAILAQFPCISSM
GNASEPESLTAPISTEGSTAGSTLVSTPIVLDSGDLYLQRYYQFETQVSDYLIQLSKNQG
SKVTGATKASLDILFPASPSDVAPVFDWQKIATATAFSKKLAVITGGPGTGKTTTVTKLL
FLLAQESLMTIKLVAPTGKAAARLSESIKASKVRLKQELAPFADRINLDNLYRVPEEAST
LHRLLGVIPNSHQFRHHKDNPLRLDLLVIDEASMVDLPMMHKVLSALPSHARLILLGDQD
QLASVEAGAVLADICAGLKLSNPHAGSKWQMRYSAHYAQALSTLTGFDLSGFINESPKIG
DSLCMLMHSHRFKGDAGIGQLAAAVNNSDKARIMQVWQKGYEELTWIEHQKTHSGNAGLD
ELLSLAVTHYRRYLELAKHASSTPTEIIDCYNEFRILCAMRAGEYGVDGINLGVTNALKQ
AKLISTELEFYQGRPVIIQSNDYNLGLFNGDIGLILLDSDQSQQGLSDKNEASHPRHSPL
RLIPPRLMAHFIQADGSILKVLPARLPSHDTCFAMTVHKSQGSEFSSVSLVLPLWPSLAQ
KQLLTKELVYTAITRAKKHFTCLGSQTVFEHASLQATQRSSGLARRLWH
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgatccagtcaacacagccgattaaagtgctattgaaagtctgggaagccgaacgttta
atcaccccactcgaccggcactttgctatcgaactggcacagttacaccagactcagctt
aagacgttagatgaagcacataccagtgaaacctcttacaagaaaggcgcataccgtgaa
ctctttttactgatctgcgcgctgctgagtaaacagttatctcaacaacacacttgtctg
cctattcatcagatatcgctggataatcccatggttgagcaggtatctcattgtcgtata
acctgcactcactctgagctcacagccatattggcgcaattcccctgcatcagctcgatg
ggtaatgcttcagagcctgagtcgttaacagcgcccatttcaacagagggttcaacagca
ggttcaacattagtctcgacaccgattgtgttagacagtggcgatctgtatctgcaacgt
tattatcaatttgagactcaggtcagtgactatctaatccaactgtcaaagaatcagggg
tctaaagtcaccggcgccactaaagccagtttagatattcttttccctgcctcacccagt
gatgtagcgccagtgtttgactggcagaaaatcgccactgccaccgcctttagtaaaaag
ttagctgtgatcactggcggccctggcacaggtaaaaccacaaccgtcactaagctgctg
tttttattagcacaagaatcgctaatgaccataaaactggtggcacctacgggtaaagct
gcggccagattaagtgaatcaatcaaagcctccaaggtgcgactgaaacaggaattagcc
ccctttgctgacagaattaatctggataacttgtatcgagtaccagaggaagcgtcaacc
ttgcacaggttgttaggggttattcccaactctcatcaatttcgccaccacaaagataac
cctcttagactggatctgctggtcatcgatgaagcctctatggtcgatctccctatgatg
cacaaggtgttatcggcactgccatctcatgcaagactcatactgcttggggatcaagac
cagcttgcttcggttgaagccggtgcggtattggccgatatctgtgcaggattaaaactc
tctaatccccatgcaggcagtaaatggcagatgcgatattcagcccactatgctcaagcg
ttatccacgctaacaggttttgatctcagtggattcatcaatgaatcgccaaaaattggt
gacagtttatgcatgttaatgcacagtcacagatttaaaggcgatgccggtattggccaa
ttagccgctgcggtaaataattcagataaagcccgcatcatgcaagtgtggcagaagggt
tacgaggaactgacttggattgagcatcaaaagacccatagcggtaatgctgggttagac
gagttactctccctcgcagtgactcattatcgccgttatcttgaattggcaaaacatgcc
agcagtacaccaactgagatcatcgattgctataacgaatttcgaattttgtgcgccatg
cgcgctggggaatatggtgtagatggcatcaacttgggcgtgaccaatgccctcaagcaa
gccaagttaatctcgactgagcttgaattttatcagggacgtccggttatcattcagagt
aatgactataacttaggcctgtttaatggtgatattggtttgatccttttagactctgac
cagtcccaacaagggctatcagataaaaatgaggcaagccaccctcgccactctccccta
aggttgatccccccaagattaatggctcactttatccaagccgatggcagtatcttaaaa
gtactccccgctcgcctgcccagccacgatacttgctttgccatgacggtacataagagc
caaggcagcgaatttagtagtgtcagtctggtattgccactctggcccagtcttgctcaa
aagcaactgttaaccaaagagctggtgtacaccgccatcacccgcgccaaaaagcacttt
acttgtctgggatcgcaaaccgtcttcgaacatgccagtttacaagcgactcaacgatct
tcaggcctcgcaagacgattatggcattaa
DBGET
integrated database retrieval system
