KEGG   Shewanella sp. MTB7: HWQ47_15635
Entry
HWQ47_15635       CDS       T10730                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
shem  Shewanella sp. MTB7
Pathway
shem03030  DNA replication
shem03430  Mismatch repair
shem03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HWQ47_15635
   03430 Mismatch repair
    HWQ47_15635
   03440 Homologous recombination
    HWQ47_15635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shem03032]
    HWQ47_15635
   03400 DNA repair and recombination proteins [BR:shem03400]
    HWQ47_15635
Enzymes [BR:shem01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HWQ47_15635
DNA replication proteins [BR:shem03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HWQ47_15635
DNA repair and recombination proteins [BR:shem03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HWQ47_15635
SSDB
Motif
Pfam: RNase_T Ant-IIb_sub-bd CAF1 DUF1507
Other DBs
NCBI-ProteinID: WBJ98194
LinkDB
Position
complement(3621435..3622112)
AA seq 225 aa
MVQNLLKTKFFWRVIRAENESLKAYYLAQKTLLTTNVMDAPLLAIDLEMTGLDAQFDQIL
SIGIVPIEKGRLILSKAEHKLVKIEGSVGQSAAIHGILDHHLDGAVSLEVAMAWFAEKIH
GQILVAHHSPLDLAFLQKGLSVHFQQRVILMAIDTLGLEKRRLMRQHEVFKEGSLRLGAS
RERYGLPVYAAHNALIDAIACGELLLAQVCAIGQGGRVNVAELLS
NT seq 678 nt   +upstreamnt  +downstreamnt
ttggtacagaacctgttgaaaactaaatttttctggcgggtcattcgagccgaaaatgaa
agcctcaaagcttattatcttgctcaaaaaacgttattaaccaccaatgttatggatgcg
cctttgttggctattgatttggagatgacggggttagatgcacagtttgatcaaatatta
agtattggtattgtaccgatagaaaagggtcgtctgatattgtcaaaagctgagcataaa
ctggttaaaatcgagggcagtgtcgggcaaagtgcagccattcacggcatcttagatcat
catcttgatggggcggtttctctagaagttgcaatggcatggtttgcagaaaaaatccat
ggtcaaatactggtcgcacaccactcccctttagatctggcttttttacaaaaaggcttg
tcagtgcactttcagcaaagagtgatattgatggccatcgacaccttgggattagaaaaa
cgcagattgatgcgtcaacatgaagtgttcaaagagggatcattgaggcttggtgcgagt
agggaacgttatggcttgcctgtttacgctgcgcacaatgcactgattgatgccattgct
tgtggggagctgttactcgctcaggtatgcgcgataggtcagggaggaagagtgaatgtt
gctgaactgctctcttaa

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