Shewanella sp. MTB7: HWQ47_16400
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Entry
HWQ47_16400 CDS
T10730
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
shem Shewanella sp. MTB7
Pathway
shem02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HWQ47_16400 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shem02000
]
HWQ47_16400 (msbA)
Enzymes [BR:
shem01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HWQ47_16400 (msbA)
Transporters [BR:
shem02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HWQ47_16400 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
DEAD
AAA_29
AAA_22
ABC_ATPase
nSTAND3
RsgA_GTPase
APS_kinase
AAA_15
G-alpha
AAA_23
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
WBJ93506
LinkDB
All DBs
Position
complement(3798404..3800218)
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AA seq
604 aa
AA seq
DB search
MTTSSNQEVWTVFKRLMVYIKPLKGVFFLAVVGLVLYGLVDMTFIAIIKPFIDGGFGGQA
SQIPSAASGINLGTSDGFSSSSDVLTMAPFVVIFLFTLRGLANFLSTYCVSYMSARLIMD
MRQQVFDHYLTLPVSYMDRENTGSLISRVTYDTEQIARATGSALISIVRDSITVIGMLVV
MFYYSWKLSLCILIIGPIIGLIITVVSRRFRKISKRIQTAMGGVTTATEQMITGHKNVLS
FGGQKTESQRFGVVNEQNRYQTMKLAMAQSVSQPLVMVIGSFALAFVLYAASLESLQSEL
TAGTFATILGAMLALLNPIKSLTRVNAEFQRGIAACTTVFELLDIEPETDNGTHTVERVK
GDLSFNHVSFSYPGQEALALDKIDFSVKQGQTIALVGRSGSGKSTIASLITRFYTGLSEG
EIMLDGVDINDYTIKCLRSQVALVSQQVTLFNDSIANNIAYAYAGEATAEQIIDAARSAH
AMEFIELLPDGMDTQIGENGVMLSGGQRQRIAIARAILRNSPVLILDEATSALDTESEKA
IQQGLDNLRLNRTSIVIAHRLSTIESADMILVIDQGRVVERGDHASLLEQGGVYSNLYQM
QFGS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatcttcgaatcaagaagtctggacagtatttaagcgcctgatggtatatatc
aaaccgcttaaaggtgtgttttttctggctgtggtaggcttggtgctttacggcctagtg
gatatgacttttattgccattattaagccgtttatagacggtggtttcggtggccaagcg
agtcaaatcccttcagctgccagcggtataaatttaggcactagtgatgggttcagctcc
tcaagtgatgtccttacgatggcgccctttgtggttatttttcttttcactcttcgtggc
ttagctaatttcctgtcgacatattgtgtttcatatatgagtgccagactcatcatggat
atgcgccaacaagtgtttgatcactacctcacattgccagtgagttatatggacagagaa
aataccggcagtttaatttcccgtgttacctatgataccgaacagattgcacgtgcaacg
ggcagtgcattgatctctatagtgcgagacagtatcactgtgatcggtatgttagttgtg
atgttttactactcttggaaactttccctttgtattttgattattggtcccattataggc
ctcattattacggttgtgagtcggcgttttcgtaaaatatcaaaacgtattcaaaccgcg
atgggaggcgtaacaacagctacggaacagatgatcactggccataagaatgtgctttct
ttcggtggccagaaaacggaatcacagcgctttggtgtcgttaacgaacagaaccgctat
caaacaatgaaacttgcgatggcccaatctgtgagtcagccattggtgatggtgatcggt
tcttttgctttggcgtttgtcctctatgccgccagtttagaaagtctgcagtctgaactg
acagcaggtacatttgcgaccatcttaggtgccatgttggccctacttaatccaataaaa
agtctgacacgcgttaatgcggaatttcagcgtggtatcgcagcttgtacgaccgtattt
gaactgttggatatcgagcctgagacggataacggaacccatacagtagagagagttaaa
ggggatcttagttttaatcatgtgagttttagctatccagggcaagaggcgttggcatta
gacaagatcgacttttcagtaaagcaaggtcagactatcgctttggttggccgctcgggt
tctggcaagtcgacgattgccagcttaattacacgtttttataccggtttgagtgaaggc
gagatcatgcttgatggtgtcgatattaatgactacaccatcaaatgtttacgtagtcag
gtggcactggtctcgcaacaagtcactctctttaatgacagtattgctaataacatagcc
tatgcctatgccggtgaagcgacagctgaacagatcatagacgcggcacgttcggcacat
gcgatggagttcattgaattgctccccgatggcatggacacccagataggtgaaaatggt
gtgatgctatcaggcggccaaagacaacgtattgcaatagcaagagcgatactgcgtaac
tcgccagtgttaattttagatgaagcgacatctgccttagacactgaatctgagaaggcg
attcaacagggattagataacctgcggttaaacaggacttctattgttattgctcatcgc
ttatcgaccatagagtcagccgatatgattttagttatcgatcaaggaagagtggtcgag
cgtggagaccatgccagtttgcttgagcaaggtggtgtctattcaaatctctatcagatg
caatttggcagttaa
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