Shewanella sp. MTB7: HWQ47_16530
Help
Entry
HWQ47_16530 CDS
T10730
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
shem Shewanella sp. MTB7
Pathway
shem03030
DNA replication
shem03430
Mismatch repair
shem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HWQ47_16530 (dnaX)
03430 Mismatch repair
HWQ47_16530 (dnaX)
03440 Homologous recombination
HWQ47_16530 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shem03032
]
HWQ47_16530 (dnaX)
03400 DNA repair and recombination proteins [BR:
shem03400
]
HWQ47_16530 (dnaX)
Enzymes [BR:
shem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HWQ47_16530 (dnaX)
DNA replication proteins [BR:
shem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HWQ47_16530 (dnaX)
DNA repair and recombination proteins [BR:
shem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HWQ47_16530 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_16
AAA_5
ResIII
AAA_14
AAA_2
PIF1
TsaE
AAA_30
AAA_18
AAA_7
Adeno_E1B_55K_N
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WBJ93530
LinkDB
All DBs
Position
complement(3833684..3836203)
Genome browser
AA seq
839 aa
AA seq
DB search
MSYQVLARKWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAK
GLNCEQGVTATPCGQCSSCIEISEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQ
DEITQQLAHVLTQEVLPFDDQALSLLAKAANGSMRDGLSLTDQAIAFGGGEVRLSQVQTM
LGCIDERHVITLFTALIQGDIAQLMQVTSQVLSFGADPQEVLRSLLELLHQITLSQFAPA
AAQLSIHREQIKSFAEQLNPEQVQLYYQLLLTGRKDLPHAPDPKSGLEMALLRAVSFVPE
TPVKRWITDKPAIVSVSELNTINSKDTVASTRQASAALTNELITSSASVVEASRNEPRKE
LSEQQVSPPEVVDDEDSALDRLNSEQALILNQAASQGMEQEVIHSVAQTSQADDVEALIS
PIVAQNSVDPNAVSDEYYAQAAQFDAQQDYQEHFQEGYSDPYPESSGDDKHQLVQQSDVV
NVSGSASTPEEDDILDAVLAARDSLLTQLSAEEPKESGGKKSESGRKEFVAPKRKPLKAV
SHEATPTDDNKTPEIEAKSNSVENEDRPPWEEPVTPVIAEEEVVGDIPFSQAVEQHNSAI
QGVKNPKPALDSKPLEVVPIHDGAVTGNDIDLKWYRLMSALDVGGRVRQLAVNSVCHHFV
EPLALLLKPNQKHLSADVAIVQLEEALSRALDKEVHVTVSVGMDTTRETPLEIRQRFHQE
LLSQAHHGLMNDSHIQWLIAEMDAEFETDSLSYSPELLSLKGNTIELVDKSNFKTLPES
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcaggtgttggccagaaaatggcgccctgccacttttgagcaaatggttggc
cagtctcatgttttacatgcgttaaccaacgcactcactcagcaaaggttacatcacgct
tatctgttttctggtactcgtggggttggcaaaaccagtttagcacgactctttgcaaaa
ggtctgaattgtgaacaaggtgtcaccgcgacgccatgtggtcaatgctcaagttgtatt
gaaatatctgaaggtcgttttgtcgatctgattgaagtcgatgcagcctcaagaacgaaa
gtcgatgatacccgtgaactactcgacaacgtccaatatcgtcctagccgtggccgtttt
aaggtttacttaatcgatgaagtgcatatgctttcgcgaagcagttttaatgcgctactt
aagacgttggaagagccaccagaacatgtaaaatttttacttgccacaaccgatccacag
cgacttcctgtcactgtgttatcacgttgtttgcaatttaacctaaagagtctgacccaa
gacgaaatcacacagcagcttgctcatgtcttgacccaagaggttttaccctttgacgac
caagccttaagcttattagctaaagcggctaatggcagtatgcgtgatggattaagcctg
actgatcaagcgatcgcgtttggtggtggtgaagttagattgagccaagttcagaccatg
ctaggttgtattgacgaacgacacgttatcaccctttttactgcgcttatccaaggtgat
atcgcgcaacttatgcaagtgacttctcaagtgctctcgtttggtgcagatcctcaagag
gtgctgcgtagtttgctagaactgctacatcaaataaccttaagccaatttgctcctgca
gctgctcaactctctattcatcgtgaacagattaaatcttttgccgagcagttaaaccca
gagcaagtgcagctttattatcaattactgcttactggacgtaaagatcttccccatgca
cctgatccaaagtcgggtctggagatggcgttactcagggcggtgtcatttgtacctgag
acgccagttaagcgttggattaccgataagcctgccatcgtttcagtgtcggaactcaat
acgattaattcaaaggataccgttgcaagtacaaggcaagcaagtgctgcactaaccaat
gagctcataacatcgtcagcttcagttgttgaagcatctagaaatgagccacgtaaagag
ttaagtgaacaacaggtatctcctccagaagtcgttgatgatgaagacagtgcacttgat
cgtttaaacagtgaacaggcgttaatattaaaccaggctgcaagtcaggggatggaacaa
gaggtgattcactcagtggctcaaaccagccaagctgatgatgtcgaagcactaatttct
cctatcgttgcccaaaattcagtagaccctaacgctgtttccgatgaatattatgctcaa
gcagcgcagtttgatgcccaacaggattatcaagaacattttcaagaaggttattcagac
ccatatcctgaatcatctggagacgacaagcatcaattagtgcagcaaagtgatgtggtg
aatgtttctggttcagcaagtacaccagaagaagatgacatcctcgatgctgttttagcg
gcgcgagatagcttattgactcaactgagtgctgaagagcctaaggagagtggtggaaaa
aagtctgaatcgggacgcaaagagttcgtagcaccaaaacgaaaacctttaaaagcagtg
tcccatgaggcaacaccgactgatgataacaaaactcctgaaatcgaggctaagtcaaat
tcggtagagaatgaagataggccaccttgggaggagcccgtaacgccagttattgccgag
gaagaggtcgttggtgatattccattcagtcaggcggttgaacagcataactcagctatt
caaggggttaaaaatcctaaacctgcactagattcaaaaccgctcgaagttgtgccaatt
catgatggtgcagtgacgggaaatgacattgatttgaaatggtatcgtttgatgtcagcc
cttgatgtcggaggacgggtacgccagttggcagtcaattcagtgtgccatcattttgta
gagcctcttgcactcttgttaaaaccgaatcagaagcatttgtcagcagatgtcgccatc
gttcagttagaagaggccttgagtagggccttagataaagaagtacatgtcacggtttct
gtggggatggatactacacgcgaaacaccattggagatacgtcagcgttttcatcaagaa
ttactatctcaggcacatcacggcttaatgaatgacagtcatattcaatggctgattgct
gagatggatgcggagtttgaaaccgatagcttaagttacagtcctgaattgttgagtttg
aaaggaaataccattgagcttgtcgataagtcgaactttaagacgctgcctgagtcataa
DBGET
integrated database retrieval system
