Shewanella sp. MTB7: HWQ47_16980
Help
Entry
HWQ47_16980 CDS
T10730
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
shem Shewanella sp. MTB7
Pathway
shem00230
Purine metabolism
shem00240
Pyrimidine metabolism
shem01100
Metabolic pathways
shem01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
HWQ47_16980 (nrdD)
00240 Pyrimidine metabolism
HWQ47_16980 (nrdD)
Enzymes [BR:
shem01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
HWQ47_16980 (nrdD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
DUF7129
Motif
Other DBs
NCBI-ProteinID:
WBJ93616
LinkDB
All DBs
Position
complement(3907649..3909766)
Genome browser
AA seq
705 aa
AA seq
DB search
MPVVIKRDGYRTPFDETRIRDAVAAAAISAGIEDNSYANQVANRVAESVADKQEIDIHDL
QDVVENQLMEGPYKSLARVYIEYRHDRDLHRETSSRLNREIRGLVDQSNAALLNENANKD
AKVIPTQRDLLAGIVAKHYATRHILPKDVVAAHESGEIHYHDLDYAPFFPMFNCMLIDLA
GMLTQGFKMGNAEIDTPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVKKSYD
KHYQVALKWEVKDAKAFATAQTEKECHDAFQSLEYEVNTLHTANGQTPFVTFGFGLGISW
ESRLIQSSMMQVRIAGLGKNRKTAVFPKLVFAIRDGVNHKVGDCNYDIKKLALKCATMRM
YPDILNYEQVEKVTGSFKTPMGCRSFLGTYEENGELIHEGRNNLGVVSLNLPRVALESKG
DEAEFYRILDQRLVIARKALDTRIERLEGVKARVAPILYMEGACGVRLNADDEISSIFKN
GRASISLGYIGLHETINALFGLDKHLYDCEVLREKAIEIIKYMKAATEKWTEETGYAFSL
YSTPSENLCSRFCKLDTQVFGVVEGVTEKGYYTNSFHLDVEKAVNPYDKLDFEQPYPELT
SGGFICYGEYPNMQHNIEALEDVWDYSFSRVPYYGTNTPIDECYDCGFTGEFSCTSKGFT
CPKCGNHEPSRVSVTRRVCGYLGSPDARPFNFGKQEEVKRRVKHL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggttattaagcgagatggttaccgcacgccttttgacgaaacaaggattaga
gatgcagttgcagcagcggcaatctcggcaggtattgaagataatagttatgcaaatcaa
gtggcaaatagagtcgctgaatctgtggctgataagcaagagattgatattcacgaccta
caagatgtggttgaaaatcaacttatggaagggccatataagtccttagcacgcgtgtat
attgaatatcgtcatgacagagatctacaccgcgaaactagcagccgtttaaaccgtgag
atccgtggtttagtcgatcagagcaatgccgcgcttctcaatgaaaatgccaataaagat
gcaaaagtgatcccgactcaaagggatctacttgctggtattgtggctaaacattatgcg
accagacatatattgccaaaagatgtggtcgcggcccatgaatcgggtgagatccattat
cacgatctcgattatgcaccatttttccctatgtttaactgtatgttgatagatcttgca
ggcatgttgacccaaggtttcaaaatgggtaatgccgagatagatactcctaagtcaatt
tcgacagcgacagccgtaacagcacaaattattgcgcaggttgccagtcatatttatggt
ggcactaccatcaatcgcatcgatgaagtgctcgcgccttttgtgaagaagagttatgac
aagcattatcaagtcgccctgaaatgggaggtaaaagatgcaaaagcgttcgcgactgcg
caaacggagaaggagtgtcatgatgctttccagtctcttgagtatgaggttaacacttta
cacactgccaatggtcaaaccccttttgtgacctttggttttggtttaggcatctcttgg
gagtctcgactaatccaatcttctatgatgcaggtgcggatagcaggattgggtaagaat
cgtaaaacggctgtctttcctaaactggtttttgctattcgtgatggtgttaatcacaaa
gtgggtgattgcaactacgacattaagaagttagcacttaagtgcgccacaatgcgtatg
tacccagacattcttaactacgaacaggtcgagaaagtaacaggttcattcaaaacgcct
atgggttgtcgaagctttcttggcacctatgaagagaatggtgagttaattcatgaaggt
cgaaataacttaggggttgtgagccttaacttgccgcgtgttgccttagaatcaaaaggt
gatgaagccgagttctatcggattctagatcagcgtttagtaattgcccgtaaagcactt
gatactcgtattgaacgtcttgaaggcgtgaaagccagagtggctccaatcctgtatatg
gaaggggcttgtggtgtgcgattaaatgccgatgatgagatctcaagtatctttaaaaat
ggccgagcctctatctctcttggttatattggtttgcatgaaaccattaacgcgctgttt
ggtttagataagcatctgtatgattgcgaagtgctgcgagagaaggctatcgagattatc
aagtatatgaaggctgccacagagaagtggactgaagagacgggttacgcctttagcctc
tacagtacaccgagtgagaacctttgtagtcgcttctgtaaactagatactcaggtgttt
ggcgtggtagaaggtgtgactgaaaagggttattacacaaatagctttcaccttgatgtt
gagaaagccgttaatccttatgacaaattagattttgagcaaccttatcctgaattaacc
agtggtggatttatctgttacggggaataccccaatatgcagcataatatcgaagcctta
gaagatgtatgggattacagttttagtcgcgttccctattatggcactaacacacccatt
gatgagtgttacgattgtggctttacaggtgagttttcctgtaccagtaagggatttacc
tgccctaagtgtggtaatcacgagccgagccgagtgtctgtaacacgccgtgtgtgtggt
tatttaggcagcccagatgcgcgtccatttaatttcggtaagcaagaagaagttaagcgc
agagtgaagcacctataa
DBGET
integrated database retrieval system
