Shewanella sp. MTB7: HWQ47_17030
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Entry
HWQ47_17030 CDS
T10730
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
shem Shewanella sp. MTB7
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shem03400
]
HWQ47_17030
DNA repair and recombination proteins [BR:
shem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HWQ47_17030
Archaeal homologous recombinant proteins
HWQ47_17030
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
WBJ93625
LinkDB
All DBs
Position
complement(3920365..3921510)
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AA seq
381 aa
AA seq
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MKFIHTSDWHIGRQLHNQSLLEDQRHVLTQIVELAVTHDVDAVIIAGDIYDRSIPPANAV
ALLDEVVNRLVNELNIPVVMIAGNHDGHERLGFASRQMRESGLHIIGPLNNVLVPIEIVG
KSGNAIFYGLPYADPAMVRHVFDSDVSTHEQAMAQLLEQVIEHDSQDLPKVVISHCFLDG
GCESESERPLSIGGADKISPTVFTPFSYAALGHLHGPQYKGEEHVRYSGSILKYSFSEQH
QKKSVTLVELTPEGKASIELLPLSAMRDVRIIEGELDMLLELGKVDLHRDDYLMVRLLDK
KAILDPMGKLRAVYPNVLHLERTGLMANNSQLAIGRDHIKKGELDMFTDFFSQVSGEPMT
DAQQAVMVNAIDELHKVESTS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccatacttcggattggcatattggccgtcaacttcataaccagagtttg
cttgaagatcagcgtcatgtgttgacgcaaattgttgagttggcagtgacccatgatgtc
gacgcagtgattattgccggtgacatctatgaccgttctataccgccagccaatgcggtt
gctttacttgatgaagtggtcaatcgcttagtcaatgaactcaatatccccgttgttatg
atcgctggtaaccatgatggtcatgaacgtttaggctttgcctctaggcagatgagggag
agcggtttacatattataggccctctcaataatgtgttggtgccgatagaaatagtgggt
aagtctggtaatgccattttctatggtttgccctatgccgaccctgcgatggtgcgtcat
gtgtttgattctgacgtgagcacccacgaacaagcgatggcgcaactgcttgaacaggtt
attgagcatgatagccaagatttacccaaggtagtgataagtcactgtttcctcgatggc
ggctgtgagtctgaatctgagcgtcctctgagtattggcggcgcggataaaatttctccc
actgtgtttactccttttagttacgctgctttaggtcatcttcacggaccacagtataag
ggcgaggagcatgttcgctattcaggttccatcttaaaatattcatttagtgagcagcat
cagaagaagtcagtgactttagtggagctgacgcccgagggcaaggcgagcattgaactg
ttacctctgagtgcgatgcgcgatgtacgtattattgaaggtgagctcgatatgctactt
gaactgggtaaagttgacttgcatcgagacgattacctgatggttaggttgctggacaag
aaggctattttagatcccatgggcaagctcagagccgtttatcccaatgtattgcatctg
gaacgtaccggtttgatggctaataatagccagcttgctatcggtcgtgatcatattaaa
aagggcgaactcgatatgttcactgattttttctctcaagtctctggtgagcctatgact
gatgcgcagcaagccgtgatggtcaatgccattgatgagctacataaagtggagagtacg
tcatga
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