Shewanella sp. MTB7: HWQ47_17035
Help
Entry
HWQ47_17035 CDS
T10730
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shem Shewanella sp. MTB7
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shem02000
]
HWQ47_17035
Transporters [BR:
shem02000
]
Other transporters
Pores ion channels [TC:
1
]
HWQ47_17035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WBJ93626
LinkDB
All DBs
Position
complement(3922074..3924023)
Genome browser
AA seq
649 aa
AA seq
DB search
MSITRNIFTLSSLTLAMGLVSPVSADEIERDRIFDIAEVIVVKGEHLQASEMSTTKWVID
ADEIAASGAQTFDQVIENVPGVYVRVGGDSTPRVDIRGLKTRHITFLINGVPASSTEDGQ
FDPSVIPTNQIAQVEVSVGPSSVLYGPGGSAGVINIITKQGDESSSLSGKVESAPDNTLN
ADISAAGSGDNWQGIMSVTHQETDGTPMSDDFEDTRNQIGDVRFNSDRKLTNYYAQGSYF
INDSTKLMANYSQRDGEWGKSPTVDRKKAPSRVEDYNEQSIQLGAAHEINEQYAVRGFVY
YNQTDMVENFYNHRMNNLNSIVESTSTVSGTNIQFISEFDYGAVLTTSVIVEKQDWFSHT
SNMRSVKAGGDGSGSGGGQGGSGDIDESIIVYTGAAEYQYQDDGQYGYSLGAAVHNYDRD
INSETDFSVQASAFYQITDSSRIHTGFARKVRYPSISDLYAVEGGNINLKAEVAHQFELG
LQQSLPFDSQLDISSYITEADDYIAKDDNKQEQNIGDYRFMGVDLQLTNRYFDNLGLTFA
YSYIDTEDSVTNERLQYRPTHNLRLQASYDFSFGLTTRLNAERIIDQVNGKGVQLNNYTL
VDFSVSQQILHDNLELYVRATNLFDELYYQSDFMPQAGRQVFVGINWQL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtctataacccgaaatatcttcacattaagtagcctaacgcttgcgatgggcttagtc
agtcctgtttctgcagatgagattgaacgcgatcgtatctttgatatcgcagaggttatt
gttgtaaaaggggaacatcttcaagcaagcgaaatgtctaccactaagtgggtcatcgat
gcagatgagatcgctgcttcaggcgcacaaacatttgatcaagtcattgagaatgtacca
ggtgtatatgttcgagtcggcggtgactctacaccacgtgttgatattcgtggtttaaaa
actcgccatattacttttttaattaacggcgtacctgcaagtagcactgaagatggtcag
tttgatccaagtgtgatcccaactaatcaaatcgcacaagttgaagtctctgtgggtcca
agttctgtactatacggacctggtggtagtgcaggtgtcatcaacattatcaccaaacaa
ggtgatgaatcatcgtcactgtcaggtaaagttgaatcagccccagacaataccctcaat
gcagatataagcgcggcgggttctggtgataactggcaaggtattatgagtgtcactcat
caagaaactgatggcacgccgatgtcagatgattttgaagatacgcgtaatcaaatcggt
gatgtgcgttttaactcggatagaaagttaactaactattatgctcaaggtagttatttc
atcaatgactcaactaagttgatggcaaactatagccaacgtgatggtgaatggggtaaa
tcacccacagttgatcgtaaaaaagcgccatcaagggtagaagattataacgaacaaagc
attcaacttggtgccgcacatgaaataaacgagcaatatgctgttcgtggttttgtttac
tataaccaaacagatatggttgagaacttctataaccacagaatgaataatttgaatagc
attgtcgaaagcacctcgacagtcagtggtactaatattcaatttattagcgaatttgat
tatggcgccgtattaaccacatcggttattgtagaaaagcaagattggttctctcatacc
agtaacatgcgcagcgttaaagccggtggtgacgggtcaggttcaggtggtggtcaagga
ggctctggcgatattgatgaaagtatcatcgtttatacgggcgctgcagaataccaatat
caagacgatggtcaatatggttacagcttaggtgctgcggtgcataattatgatcgcgat
attaatagcgaaactgacttttcagtgcaagcatcagcattttatcaaatcacagattca
agtcgtatacacaccggttttgctcgaaaagtacgttatccatcaattagcgatttatac
gcggttgagggaggtaatataaaccttaaagcggaagttgctcaccagtttgaacttggc
ttacagcaatctttaccttttgatagccaattagatattagtagttacattactgaagct
gatgattacatagctaaagatgacaacaagcaagagcaaaatattggtgactaccgtttt
atgggcgtcgatctgcagctaactaatcgttattttgataacttaggattaacctttgct
tatagctatattgacacagaagatagtgtgacgaatgaacgtctacaataccgtcctact
cacaacctacgcttacaagcgagttatgatttctcatttggtttaacgacgcgtttaaat
gcagaacgtatcatcgatcaagtgaacggcaaaggcgttcagttaaacaactatacatta
gttgatttcagcgtgagccaacagatactgcatgataatttagagctatatgttagagct
actaacttgtttgatgaactttattatcaaagtgactttatgccacaagcgggtcgccaa
gtctttgtcggcattaactggcaactatag
DBGET
integrated database retrieval system
