Shewanella sp. MTB7: HWQ47_20375
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Entry
HWQ47_20375 CDS
T10730
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
shem Shewanella sp. MTB7
Pathway
shem00220
Arginine biosynthesis
shem00240
Pyrimidine metabolism
shem00250
Alanine, aspartate and glutamate metabolism
shem01100
Metabolic pathways
shem01110
Biosynthesis of secondary metabolites
shem01240
Biosynthesis of cofactors
Module
shem_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HWQ47_20375 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HWQ47_20375 (carB)
00220 Arginine biosynthesis
HWQ47_20375 (carB)
Enzymes [BR:
shem01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HWQ47_20375 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
ATP-grasp_2
BamE
Motif
Other DBs
NCBI-ProteinID:
WBJ94229
LinkDB
All DBs
Position
complement(4696542..4699760)
Genome browser
AA seq
1072 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRNIIAKERPDAILPTMGGQTALNCALELESKGVLKEFNVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRAGIAHTMDEANAVVAELGFPCIIRPSFTMGGSGGG
IAYNKEEFEEICSQGLDLSPTSELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDPM
GVHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPVDGRMVIIEM
NPRVSRSSALASKATGFPIARIAAKLAIGYTLDELKNDITGGNTPASFEPSIDYVVTKLP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGMNGLDPIIDIDEPDA
MTRIRHELKEPGAERIWYIADAFRAGLSVNDVFGLTNIDPWFLVQIEELIKLESDVKDSG
MSGMSESFLRQLKRKGFSDIRLSLLLGISESEMRKLRHKHEIFPVYKRVDTCAAEFSTDT
AYMYSTYEEECEAAPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDFDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARELEAAGVPI
IGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVERAVISAARIGYPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNASPVLLDRFLDNAIEVDIDAICDGETVVIGSIMEH
IEQAGVHSGDSGCSLPPYSLSDDVQNRMREQVGKLAMELGVIGLMNVQFAVKDDEIYMIE
VNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKSQNFTKEVIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATCEVPKSGRALLSVRDSDKARVVDLA
AKLIGLGYEIDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNDEYTYIVNTTEGRQ
AIEDSRQLRRGALRYKVNYTTTLNAAFATCMAHAADDRTNVNSVQELHKRIK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatataaaaagtattcttatcctaggtgctgggccgattgttatt
ggtcaagcatgtgagtttgattactctggtgcccaggcttgtaaagccctgcgcgaagag
ggttaccgagttattttggttaactctaatccagcaacgatcatgacagaccctgagatg
gccgatgcaacttatatcgagcctatccactgggaagttgttcgtaacattattgccaaa
gagcgccctgatgcgatacttccgaccatgggcggtcagacagcacttaactgtgcgctt
gaattagagagtaaaggcgttcttaaagagtttaatgtcgaaatgatcggtgcaactgcc
gatgcaattgataaagctgaagatcgtagccgtttcgataaggcaatgaaatccattggt
cttgagtgtcctcgtgcgggtattgctcataccatggatgaagcgaatgccgtcgttgct
gagcttggttttccttgtattatccgtccgtcatttacaatgggtggcagcggtggcggt
attgcctataacaaagaggaattcgaggagatctgttctcagggtcttgacctctcaccg
acaagtgaactgcttattgatgagtcattgatcggctggaaagagtatgagatggaagtg
gtacgtgatcgcaatgacaattgcatcatcgtctgcgctatcgaaaactttgatcctatg
ggtgttcacaccggtgactctattaccgttgcaccagcgcaaactctgaccgataaagag
tatcagttgatgcgtaatgcatcccttgcagtattgcgtgagattggtgtcgaaaccggt
ggctcaaacgtacagtttggtatcaaccctgttgatggccgtatggttatcattgagatg
aacccgcgcgtatcacgttcatcagctcttgcttcgaaagccacaggctttccgatcgct
agaatagcggcaaaattggcaatcggttatacgttagatgagcttaaaaatgatatcact
ggtggtaatactccagcctcgtttgaaccctccatcgattacgtcgtgactaaattaccc
cgctttaactttgagaagtttgccggcgcaaatgatcgtcttaccactcagatgaagtct
gtgggtgaagtgatggccattggccgcaccttccaagagtcgctacaaaaagcgcttcgt
gggcttgaagtgggtatgaacggcttagatccgattatcgatattgatgagcctgatgcc
atgacacgtattcgtcatgagcttaaagagccgggtgctgagcgtatttggtatattgcc
gatgctttccgtgctggattatctgtgaatgatgtttttggtctgacgaacattgatcct
tggttcttagttcaaattgaagaactgattaagcttgaatctgatgttaaggattcaggt
atgtcaggcatgagtgaatcatttttacgtcaactaaagcgtaaaggtttctctgatatc
agattgtcattactacttgggatcagtgaatctgagatgcgtaaactgcgtcacaaacac
gagatattcccggtttataagcgcgtcgatacttgtgcggcagaattctcaacggatacg
gcttacatgtattctacttatgaagaggaatgtgaagctgctccatcaaatcgtgacaag
atcatgattttaggtggtggaccaaacagaattggtcaaggtattgaatttgattactgt
tgtgttcatgcggccttagcgcttcgtgaagatggttatgaaaccattatggtcaattgt
aatcccgaaaccgtatctacggatttcgatacttctgacagactatatttcgagcctgta
acccttgaagatgtgttagagattgtacgtattgaaaagccgaaaggcgttattgttcaa
tacggtggtcagactccgctgaaacttgctcgtgagttagaagctgcaggcgtaccgatt
ataggcactagccctgatgcgattgaccgcgctgaagaccgtgaacgtttccagcaagct
atccaacgtcttgagatgaagcaacctgaaaatgatacagtaaccactgttgaaagagcg
gttatttcagctgcgcgtatcggttatccgttagtggttcgtccatcttatgtattgggt
ggtcgcgcaatggagattgtttatgatgagcaagatttgcgtcgttactttaacgaagca
gttagcgtatctaatgcatcaccggtactgctagaccgtttccttgataacgctatagaa
gtcgatattgatgcgatatgtgatggtgaaactgtggttatcggttctatcatggaacac
attgagcaagcgggtgttcactctggtgattcaggttgttcactgccaccatatagttta
agtgacgatgttcaaaatcgtatgcgcgagcaggtgggtaaactggcgatggaactgggc
gttatcggtttgatgaatgttcagtttgctgttaaggatgatgagatctacatgatcgaa
gtcaatccacgtgcagcacgtactgtcccatttgtttctaaagcaactggggtgccttta
gctaagattgcagcacgcgtgatggctggccaaagccttaaatcacagaacttcactaaa
gaagttattccaccttattactctgtgaaagaggtggtactgccttttaacaagttccct
ggtgtcgatcctttgcttggtcctgaaatgcgttcaacgggtgaagtgatgggcgtgggt
gatacatttgctgaagcctatgccaaagctcaacttggtgcgacatgtgaagtgcctaag
tctggacgtgcactattgtctgttcgtgacagtgataaggcgcgtgttgtcgatttagcg
gcgaagttaatcggtttaggctatgagatcgatgcaactcatggtactgcggttatctta
ggtgaagcgggtattaaccctcgcttagtcaataaggtacacgaaggtcgtcctcatatt
cttgaccgtattaagaatgatgaatacacctatattgtgaatacaactgaaggtcgtcaa
gcgattgaagattcacgtcaacttcgccgtggtgccttgcgttataaagtgaactataca
acgacgttaaatgctgcatttgcaacttgtatggcccatgctgctgatgacagaactaat
gtcaattcggtacaagagttacacaaacggattaagtag
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