Shewanella sp. MTB7: HWQ47_20935
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Entry
HWQ47_20935 CDS
T10730
Name
(GenBank) serine hydrolase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
shem Shewanella sp. MTB7
Pathway
shem00550
Peptidoglycan biosynthesis
shem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HWQ47_20935
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shem01002
]
HWQ47_20935
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shem01011
]
HWQ47_20935
Enzymes [BR:
shem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HWQ47_20935
Peptidases and inhibitors [BR:
shem01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
HWQ47_20935
Peptidoglycan biosynthesis and degradation proteins [BR:
shem01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HWQ47_20935
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
CytoC_RC
Motif
Other DBs
NCBI-ProteinID:
WBJ94320
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All DBs
Position
4810808..4811980
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AA seq
390 aa
AA seq
DB search
MNFLNRPLKSFILATSLASSFVFAAPVVTPNAPTVAAKAFVLMDYNTGQIIAEENAYESL
NPASLTKMMTSYVIGHEIKVGNISPDDQVTISQKAWSKNFPDSSKMFIEVGKQVSVDDLN
HGIIIQSGNDACVAMAEHIAGTEDGFVDLMNSWAKQLGMQDSYFENSHGLDSDNHKTTAY
DMAILGAALIRDVPEEYAVYSKKSFTFNGIKQYNRNGLLWDKSLNVDGIKTGHTSGAGYN
LVTSATKDDMRLVAVVMGTKSEAARKAESKKILNYGFRFFETITPYKAGDSFVTQKIWYG
DKESVDLGVITDTPITINRGQAKNLQANFELTKELTAPLAKGETVGRIYFQLNGKDIAQF
PLVTLQEVNEGSWFSKLMDYFKQMFAGWFS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaattttttaaaccgacctttaaaatcctttattcttgcaactagtcttgcatcttct
ttcgtttttgctgctcccgttgtgacaccaaatgcgccaacagtagccgctaaagccttc
gttctaatggattacaatactgggcaaattattgctgaagagaatgcctacgaaagtttg
aatccggccagcttaactaaaatgatgaccagttatgtcattggtcatgagatcaaagtg
ggtaatatttctcctgatgaccaagtcaccatcagtcaaaaagcctggtctaagaacttc
cctgactcctcaaaaatgttcatcgaagtgggtaaacaggtttcggtagacgatctcaac
cacggcattattattcaatcaggtaacgatgcctgtgttgctatggccgaacatattgct
ggcaccgaagatggtttcgtcgatctgatgaactcttgggctaaacagctaggtatgcaa
gacagctactttgagaactctcatggactcgactctgacaatcacaagacaactgcttat
gatatggcaattttaggggctgcacttatacgtgatgttcctgaagaatatgcggtatat
agcaagaaatctttcaccttcaatggcataaagcaatataaccgcaatggtctattgtgg
gacaagagtctaaatgtagatggtattaaaacaggtcacacttcaggggcaggttataac
ttagtgacctctgcgaccaaggatgatatgcgtttagttgccgtcgttatgggaactaaa
agtgaagctgcacgtaaagcagaaagtaaaaagatcctaaattatggttttcgcttcttt
gaaacaataaccccatataaagcgggcgacagcttcgtaactcaaaaaatttggtatggt
gataaggaatctgtggatttaggcgttatcactgatacgcctatcacgattaatcgtggt
caagctaaaaacctacaagcaaactttgagcttacaaaagagctaactgcaccgttagcg
aagggagaaactgtcggtcgtatctacttccagcttaatggtaaagatatcgctcagttc
ccacttgtgacgcttcaagaagtgaatgaaggcagttggttcagcaagttaatggattat
tttaagcagatgtttgcgggctggtttagttaa
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